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The map label for this gene is 110679215

Identifier: 110679215

GI number: 110679215

Start: 1837478

End: 1838224

Strand: Direct

Name: 110679215

Synonym: RD1_1926

Alternate gene names: NA

Gene position: 1837478-1838224 (Clockwise)

Preceding gene: 110679214

Following gene: 110679217

Centisome position: 44.46

GC content: 62.25

Gene sequence:

>747_bases
ATGCCTGCGTGGGCGCGGCGTCTTCTGGCGCGCTGCCTGCACCGGTTCACCCGCCGCGCGTTGCCAGTGTTGTGCCTGTT
GCAGGGCGCGGCACAGGCCTCTGAGGCCATCGTCTCGGCAAAGTACGAAGGCCCGACGGATCGCTATGCGCATGCCGTCC
TTGGGGATGGGATCGAGCATGAAACACTTGTCCTGACACTGGCCGATGGGACGTTTCGCCGGTTCACCCTGCCGGAGACG
TCGGTTTTTGAAGATACCGAACCCCGGCTTGCCGATCTTGACGCAGATGGGTCACCGGAAGTCATCGTTGTGCAAAGCGA
CCAGTCGGAGGGCGCGCGACTGGCTGTTTATGACGCGGCCGGTCTGATCACGGCGACCCCCTACATCGGAAGTCGCTTCC
GCTGGCTTGCCCCTTTGGGCGCGTCTGACCTTGATGGGGACGGGCGTATGGAGATCGCCTACATTGACCGTCCCCATCTG
GCAAAAACACTGCGCATCTGGCGCTATGAAGACCGCCGGCTGAACGACATCGCGGCACTTGCCGGGGTCACGAACCATCG
CATTGGGGAGCGTGACATCGCCGGTGGCATCCGGCAGTGCGACGGCATGCCGGAGATGATCGTCGCAGGTGCCGATTGGC
AAGAATTGCGTGCGGTCCGTTTCGTGGGCGGTCTTTTTGAAACGCGACTTCTTGGTGCGGACACGTCCCGTGATGCGTTT
GCAGCTGCCATGAAATGCGAAGGCTGA

Upstream 100 bases:

>100_bases
CCTATGAACCTGATCCGGCGCGCTCGCGGCTGACCTGCCAGCTGAAAGTTACGGATGCTCTGGATGGGCTGATCGTGCAA
ATGCCGGAAAAACAGATCTG

Downstream 100 bases:

>100_bases
AGCGTCATGCGAAAAACCTGAACCACGCAAGCGCTGCCTGAAATCGACGGTTTCAACGCGGTATGTGAAACGTGATGTTT
CAGGTATTTCGTCAGACGCT

Product: FG-GAP repeat-containing protein

Products: NA

Alternate protein names: FG-GAP Repeat-Containing Protein; FG-GAP Repeat Domain Protein; Integrin Alpha Chain

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPAWARRLLARCLHRFTRRALPVLCLLQGAAQASEAIVSAKYEGPTDRYAHAVLGDGIEHETLVLTLADGTFRRFTLPET
SVFEDTEPRLADLDADGSPEVIVVQSDQSEGARLAVYDAAGLITATPYIGSRFRWLAPLGASDLDGDGRMEIAYIDRPHL
AKTLRIWRYEDRRLNDIAALAGVTNHRIGERDIAGGIRQCDGMPEMIVAGADWQELRAVRFVGGLFETRLLGADTSRDAF
AAAMKCEG

Sequences:

>Translated_248_residues
MPAWARRLLARCLHRFTRRALPVLCLLQGAAQASEAIVSAKYEGPTDRYAHAVLGDGIEHETLVLTLADGTFRRFTLPET
SVFEDTEPRLADLDADGSPEVIVVQSDQSEGARLAVYDAAGLITATPYIGSRFRWLAPLGASDLDGDGRMEIAYIDRPHL
AKTLRIWRYEDRRLNDIAALAGVTNHRIGERDIAGGIRQCDGMPEMIVAGADWQELRAVRFVGGLFETRLLGADTSRDAF
AAAMKCEG
>Mature_247_residues
PAWARRLLARCLHRFTRRALPVLCLLQGAAQASEAIVSAKYEGPTDRYAHAVLGDGIEHETLVLTLADGTFRRFTLPETS
VFEDTEPRLADLDADGSPEVIVVQSDQSEGARLAVYDAAGLITATPYIGSRFRWLAPLGASDLDGDGRMEIAYIDRPHLA
KTLRIWRYEDRRLNDIAALAGVTNHRIGERDIAGGIRQCDGMPEMIVAGADWQELRAVRFVGGLFETRLLGADTSRDAFA
AAMKCEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27212; Mature: 27081

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWARRLLARCLHRFTRRALPVLCLLQGAAQASEAIVSAKYEGPTDRYAHAVLGDGIEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCC
ETLVLTLADGTFRRFTLPETSVFEDTEPRLADLDADGSPEVIVVQSDQSEGARLAVYDAA
CEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEEEECC
GLITATPYIGSRFRWLAPLGASDLDGDGRMEIAYIDRPHLAKTLRIWRYEDRRLNDIAAL
CCEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHH
AGVTNHRIGERDIAGGIRQCDGMPEMIVAGADWQELRAVRFVGGLFETRLLGADTSRDAF
HCCHHCCCCCHHHHCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAAMKCEG
HHHHCCCC
>Mature Secondary Structure 
PAWARRLLARCLHRFTRRALPVLCLLQGAAQASEAIVSAKYEGPTDRYAHAVLGDGIEH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCC
ETLVLTLADGTFRRFTLPETSVFEDTEPRLADLDADGSPEVIVVQSDQSEGARLAVYDAA
CEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEEEECC
GLITATPYIGSRFRWLAPLGASDLDGDGRMEIAYIDRPHLAKTLRIWRYEDRRLNDIAAL
CCEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHH
AGVTNHRIGERDIAGGIRQCDGMPEMIVAGADWQELRAVRFVGGLFETRLLGADTSRDAF
HCCHHCCCCCHHHHCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AAAMKCEG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA