Click here to switch to the map view.

The map label for this gene is 110679194

Identifier: 110679194

GI number: 110679194

Start: 1817789

End: 1818547

Strand: Reverse

Name: 110679194

Synonym: RD1_1905

Alternate gene names: NA

Gene position: 1818547-1817789 (Counterclockwise)

Preceding gene: 110679195

Following gene: 110679193

Centisome position: 44.0

GC content: 54.68

Gene sequence:

>759_bases
ATGCTTAGAACGACAGTTGCAGCAGCGGCGCTGCTTTCATTTGGATCGGTTGCACATGCAACGTCGATCTCTATTCAGAC
CTTTACAATTGCTGACTTCAACAGCCTGACCAGCAGCGCTGTGATCGAAGACTTCGAAGATCAGAGCACGCTGACCGGCT
TGTTCGAAAATGGCGCTAACGTTGACGGCACGGGCGGCACCACAGAAGGCGAAATCCAGGGTGTGCTTGGAACTTCCGTT
GGTACGTTCACAACAATCGGGCCAATCGGCAACGGTTCCACTTGTGGCGCGCTTGATCTCAATGGCGATAATTGCACGAA
CATCGCTCTGCAAGAAGATCCAGGCCAGAACGGTCAGGGGAACTTGGTGCCTGCTGCCGGTGATTGGTCAATCAACTCCA
ACGATACGCTCGGCGTAATCTGGCAAGCTGCTCTGGCGGGTGGGACGTTCTTTGACTCCCTCGTTTTCGCGATCCAAGAT
GCGGCGGATGCAGGCGCGAAGAAGTTGGCAGTTTCGGCTGACGGTGTGACTGAGACATTCGACAACCTCGGCAACGGAAA
CGAAAGCATTGTTGTTGTTTCTTTCGGAACAGCTGTAAACGCGGCAACCGTGAACATCGAAACGTCGGCAAACGACGGTT
TCACAATTGACGGCGCAGCGATCAGCCCCGTTCCACTGCCAGCATCTTCGCTGCTGTTGATCGGTGGTATGGCTGCTCTG
GCAGGCGTGGCACGTCGCCGGAAGAACAAAAAAGCCTGA

Upstream 100 bases:

>100_bases
AAAAATTAACCGCATTATCTTAATCGGCGCGTTTTCGCTTGAAATTAACGGGGATTAACGAGATATTAACGTCACAATTA
CATTTTTAACGAGGTAACTC

Downstream 100 bases:

>100_bases
ACACGGCTTTAGGTCTTACAAAGGGCGCTCCGATGTTTCATCGGGGCGCTTTTTTCATGTCTTGGCCCCATACATCATCC
TGCCGCTTTCCTGTTGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLRTTVAAAALLSFGSVAHATSISIQTFTIADFNSLTSSAVIEDFEDQSTLTGLFENGANVDGTGGTTEGEIQGVLGTSV
GTFTTIGPIGNGSTCGALDLNGDNCTNIALQEDPGQNGQGNLVPAAGDWSINSNDTLGVIWQAALAGGTFFDSLVFAIQD
AADAGAKKLAVSADGVTETFDNLGNGNESIVVVSFGTAVNAATVNIETSANDGFTIDGAAISPVPLPASSLLLIGGMAAL
AGVARRRKNKKA

Sequences:

>Translated_252_residues
MLRTTVAAAALLSFGSVAHATSISIQTFTIADFNSLTSSAVIEDFEDQSTLTGLFENGANVDGTGGTTEGEIQGVLGTSV
GTFTTIGPIGNGSTCGALDLNGDNCTNIALQEDPGQNGQGNLVPAAGDWSINSNDTLGVIWQAALAGGTFFDSLVFAIQD
AADAGAKKLAVSADGVTETFDNLGNGNESIVVVSFGTAVNAATVNIETSANDGFTIDGAAISPVPLPASSLLLIGGMAAL
AGVARRRKNKKA
>Mature_252_residues
MLRTTVAAAALLSFGSVAHATSISIQTFTIADFNSLTSSAVIEDFEDQSTLTGLFENGANVDGTGGTTEGEIQGVLGTSV
GTFTTIGPIGNGSTCGALDLNGDNCTNIALQEDPGQNGQGNLVPAAGDWSINSNDTLGVIWQAALAGGTFFDSLVFAIQD
AADAGAKKLAVSADGVTETFDNLGNGNESIVVVSFGTAVNAATVNIETSANDGFTIDGAAISPVPLPASSLLLIGGMAAL
AGVARRRKNKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25247; Mature: 25247

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTTVAAAALLSFGSVAHATSISIQTFTIADFNSLTSSAVIEDFEDQSTLTGLFENGAN
CCCHHHHHHHHHHHCCHHHEEEEEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCC
VDGTGGTTEGEIQGVLGTSVGTFTTIGPIGNGSTCGALDLNGDNCTNIALQEDPGQNGQG
CCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCC
NLVPAAGDWSINSNDTLGVIWQAALAGGTFFDSLVFAIQDAADAGAKKLAVSADGVTETF
CEEECCCCCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
DNLGNGNESIVVVSFGTAVNAATVNIETSANDGFTIDGAAISPVPLPASSLLLIGGMAAL
HHCCCCCCEEEEEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
AGVARRRKNKKA
HHHHHHHHCCCC
>Mature Secondary Structure
MLRTTVAAAALLSFGSVAHATSISIQTFTIADFNSLTSSAVIEDFEDQSTLTGLFENGAN
CCCHHHHHHHHHHHCCHHHEEEEEEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCC
VDGTGGTTEGEIQGVLGTSVGTFTTIGPIGNGSTCGALDLNGDNCTNIALQEDPGQNGQG
CCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCC
NLVPAAGDWSINSNDTLGVIWQAALAGGTFFDSLVFAIQDAADAGAKKLAVSADGVTETF
CEEECCCCCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
DNLGNGNESIVVVSFGTAVNAATVNIETSANDGFTIDGAAISPVPLPASSLLLIGGMAAL
HHCCCCCCEEEEEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
AGVARRRKNKKA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA