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The map label for this gene is yhiR [H]

Identifier: 110679193

GI number: 110679193

Start: 1816869

End: 1817660

Strand: Reverse

Name: yhiR [H]

Synonym: RD1_1904

Alternate gene names: 110679193

Gene position: 1817660-1816869 (Counterclockwise)

Preceding gene: 110679194

Following gene: 110679191

Centisome position: 43.98

GC content: 56.06

Gene sequence:

>792_bases
ATGCTAAGCTACCAACATATCTACCACGCGGGCAATCTTGCCGATGTGCATAAACATGTGCTGCTGGCGTGGATTTTGTC
TTACATGCTGCGCAAGGACAAACCGCTTTCCTATATCGAGACTCATGCGGGCCGCGGGCTTTATGACCTGCAGGACCCGG
CAGCGCTGAAAACGGCTGAGGCAGCGCAGGGTATAGAGAAAGCCCACGCCTTTTTCGACGATACACATCCTTTTGCGACC
GTCCTGACCAAAATCCGGCGTGATTTCGGGACCTCGTTTTACCCCGGCTCCCCCCTGATCGCGGCCTCCCTGCTCAGGCC
CGGTGACCGGATGCATTTTGCCGAACTTCACCCGGCTGAATTTGAGGCATTGGATTTCAATACCTCCGCAACCGGCGCAA
AATGCTACAAGATGGACGGGTTTGCCTTGGCGCATTCCATCTGCCCGCCGACCCCGCGACGTGGCGCGATGCTTATTGAC
CCAAGTTATGAACTCAAATCCGACTACAGCAAAATTCCGCAGCAGATCGCAAAGTTGAACAAAGCATGGAATGTGGGCGT
GATCTGCCTATGGTACCCGATCCTGAAGGTCAGCCAGCACATTGGCATGTTGCAAGGCCTGCAGCGCGATCACCCCAACG
CGCTGCGCCATGAGGTTGCGTTTCCGCCTGCCAAAAAGGGGCATGGCATGATCGGCTCTGGCATGTTTGTGATCAATCCC
CCCTATGGTCTGGCCGAAGAGATGACCCGCCTCGGCACGCATTTTGGGCAGGCCAAGCGGCTTGTCTCATAA

Upstream 100 bases:

>100_bases
TCCGATGTTTCATCGGGGCGCTTTTTTCATGTCTTGGCCCCATACATCATCCTGCCGCTTTCCTGTTGTGCAGGCGTGTC
ATTCATTCTAGCGATGTATC

Downstream 100 bases:

>100_bases
CGCGTTCAACGCGGCACAGGGCGAAGCAACGACATGACCAGATCACATCGGTGTGATTGACACCTGATCCATCCACCTTT
GCCTGCAATCAAAGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLSYQHIYHAGNLADVHKHVLLAWILSYMLRKDKPLSYIETHAGRGLYDLQDPAALKTAEAAQGIEKAHAFFDDTHPFAT
VLTKIRRDFGTSFYPGSPLIAASLLRPGDRMHFAELHPAEFEALDFNTSATGAKCYKMDGFALAHSICPPTPRRGAMLID
PSYELKSDYSKIPQQIAKLNKAWNVGVICLWYPILKVSQHIGMLQGLQRDHPNALRHEVAFPPAKKGHGMIGSGMFVINP
PYGLAEEMTRLGTHFGQAKRLVS

Sequences:

>Translated_263_residues
MLSYQHIYHAGNLADVHKHVLLAWILSYMLRKDKPLSYIETHAGRGLYDLQDPAALKTAEAAQGIEKAHAFFDDTHPFAT
VLTKIRRDFGTSFYPGSPLIAASLLRPGDRMHFAELHPAEFEALDFNTSATGAKCYKMDGFALAHSICPPTPRRGAMLID
PSYELKSDYSKIPQQIAKLNKAWNVGVICLWYPILKVSQHIGMLQGLQRDHPNALRHEVAFPPAKKGHGMIGSGMFVINP
PYGLAEEMTRLGTHFGQAKRLVS
>Mature_263_residues
MLSYQHIYHAGNLADVHKHVLLAWILSYMLRKDKPLSYIETHAGRGLYDLQDPAALKTAEAAQGIEKAHAFFDDTHPFAT
VLTKIRRDFGTSFYPGSPLIAASLLRPGDRMHFAELHPAEFEALDFNTSATGAKCYKMDGFALAHSICPPTPRRGAMLID
PSYELKSDYSKIPQQIAKLNKAWNVGVICLWYPILKVSQHIGMLQGLQRDHPNALRHEVAFPPAKKGHGMIGSGMFVINP
PYGLAEEMTRLGTHFGQAKRLVS

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=257, Percent_Identity=38.5214007782101, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 29275; Mature: 29275

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYQHIYHAGNLADVHKHVLLAWILSYMLRKDKPLSYIETHAGRGLYDLQDPAALKTAE
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
AAQGIEKAHAFFDDTHPFATVLTKIRRDFGTSFYPGSPLIAASLLRPGDRMHFAELHPAE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEHHCCCCC
FEALDFNTSATGAKCYKMDGFALAHSICPPTPRRGAMLIDPSYELKSDYSKIPQQIAKLN
CEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
KAWNVGVICLWYPILKVSQHIGMLQGLQRDHPNALRHEVAFPPAKKGHGMIGSGMFVINP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCEEEECC
PYGLAEEMTRLGTHFGQAKRLVS
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSYQHIYHAGNLADVHKHVLLAWILSYMLRKDKPLSYIETHAGRGLYDLQDPAALKTAE
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
AAQGIEKAHAFFDDTHPFATVLTKIRRDFGTSFYPGSPLIAASLLRPGDRMHFAELHPAE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEHHCCCCC
FEALDFNTSATGAKCYKMDGFALAHSICPPTPRRGAMLIDPSYELKSDYSKIPQQIAKLN
CEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
KAWNVGVICLWYPILKVSQHIGMLQGLQRDHPNALRHEVAFPPAKKGHGMIGSGMFVINP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCEEEECC
PYGLAEEMTRLGTHFGQAKRLVS
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]