| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is artQ [H]
Identifier: 110679186
GI number: 110679186
Start: 1812400
End: 1813236
Strand: Reverse
Name: artQ [H]
Synonym: RD1_1897
Alternate gene names: 110679186
Gene position: 1813236-1812400 (Counterclockwise)
Preceding gene: 110679187
Following gene: 110679185
Centisome position: 43.87
GC content: 60.22
Gene sequence:
>837_bases ATGTCGTGTTATCTGACGACACCCAAACACATGTCGCTCTATTGGTCGGTGCTGACGGTTCTTCTGCTGCTGGCCATCAC GGCCCCCGTGGCTTTGGCATTCGGGTTTGGCGGCGCATCCGCTGCACGCTCAAACATTGCGCCCCTGCGGTGGTTTGGCA AATCCTACATTGCCGTGGTGCGCGGCGTGCCGGATATCGCCTTTTTCCTGTTTTTCGTCATCGCGCTGGATCAGGGGATC GAATATCTCAGACACAAGGCACTCTGCCCCGACTGGTCGGAACCAATCCGGCAGGGGAACGATTTTGTCGTCTGTCAGGC GGCGAAAATGCCCTTGGGCTCGGCCCCGCAGTGGGTCCATGAGAGCTATGGCTTTGCGCTTGCGGTGCTGACATTCGCCA TTGTCTTCGGCGCCTTTGCCGCCAACGTTCTGTTCGGGGCGATGCGGGCTGTGCCGCGCAGCCAACTTGAAACTGCCGAG GCTTATGGCATGTCGCGCCGCCAGACCTTTTGGCGGGTGTTGGTGCCGCAGATGTGGGTCTATGCGCTGCCGGGTCTGTC CAATCTCTGGATGGTGCTGATCAAGGCCACGCCGCTGCTCTTCCTGCTGGGTGTCGAAGACATCGTCTATTGGGCCCGCG AATTGGGTGGGACCAAGACGCCTCGCTTCACGGATTATCCGCATGGCGACTGGCGCATGTGGTATTTCCTTGCGCTTCTG GTCTTTTATCTGCTGTTCACGCGCGTCTCCGAGATCGTGCTTGAACGGGTCATGGCCCGCCTGACCCACGGTCAGGCAAC CGCCGCCGGTGAAGCGCAACGAAAGGCCGCCGCATGA
Upstream 100 bases:
>100_bases AAACCGGCGCGCGCCTCATCGTGCGCCGGTTTTCTTTCAAGCGAGTTAGATTATTTTCAGCTTTTGCACAGACCCGAGTA TTCTGCCCGACTGGCAATGG
Downstream 100 bases:
>100_bases GTTGCTGGCAAACCATTCAGGATTATGGCCTGCGCGCGATCGGGATCGGGGAGCGGTTGCTGCCCCGCGATGATTTCACA CTGTGCCAACAGTTTACACT
Product: arginine/histidine-ABC transporter, permease protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSCYLTTPKHMSLYWSVLTVLLLLAITAPVALAFGFGGASAARSNIAPLRWFGKSYIAVVRGVPDIAFFLFFVIALDQGI EYLRHKALCPDWSEPIRQGNDFVVCQAAKMPLGSAPQWVHESYGFALAVLTFAIVFGAFAANVLFGAMRAVPRSQLETAE AYGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRMWYFLALL VFYLLFTRVSEIVLERVMARLTHGQATAAGEAQRKAAA
Sequences:
>Translated_278_residues MSCYLTTPKHMSLYWSVLTVLLLLAITAPVALAFGFGGASAARSNIAPLRWFGKSYIAVVRGVPDIAFFLFFVIALDQGI EYLRHKALCPDWSEPIRQGNDFVVCQAAKMPLGSAPQWVHESYGFALAVLTFAIVFGAFAANVLFGAMRAVPRSQLETAE AYGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRMWYFLALL VFYLLFTRVSEIVLERVMARLTHGQATAAGEAQRKAAA >Mature_277_residues SCYLTTPKHMSLYWSVLTVLLLLAITAPVALAFGFGGASAARSNIAPLRWFGKSYIAVVRGVPDIAFFLFFVIALDQGIE YLRHKALCPDWSEPIRQGNDFVVCQAAKMPLGSAPQWVHESYGFALAVLTFAIVFGAFAANVLFGAMRAVPRSQLETAEA YGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRMWYFLALLV FYLLFTRVSEIVLERVMARLTHGQATAAGEAQRKAAA
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=30.1369863013699, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788646, Length=241, Percent_Identity=31.5352697095436, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31112; Mature: 30981
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCYLTTPKHMSLYWSVLTVLLLLAITAPVALAFGFGGASAARSNIAPLRWFGKSYIAVV CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH RGVPDIAFFLFFVIALDQGIEYLRHKALCPDWSEPIRQGNDFVVCQAAKMPLGSAPQWVH HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHH ESYGFALAVLTFAIVFGAFAANVLFGAMRAVPRSQLETAEAYGMSRRQTFWRVLVPQMWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH YALPGLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRMWYFLALL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH VFYLLFTRVSEIVLERVMARLTHGQATAAGEAQRKAAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCC >Mature Secondary Structure SCYLTTPKHMSLYWSVLTVLLLLAITAPVALAFGFGGASAARSNIAPLRWFGKSYIAVV CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH RGVPDIAFFLFFVIALDQGIEYLRHKALCPDWSEPIRQGNDFVVCQAAKMPLGSAPQWVH HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCCCHHHH ESYGFALAVLTFAIVFGAFAANVLFGAMRAVPRSQLETAEAYGMSRRQTFWRVLVPQMWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH YALPGLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRMWYFLALL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH VFYLLFTRVSEIVLERVMARLTHGQATAAGEAQRKAAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]