| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679183
Identifier: 110679183
GI number: 110679183
Start: 1809479
End: 1810171
Strand: Reverse
Name: 110679183
Synonym: RD1_1893
Alternate gene names: NA
Gene position: 1810171-1809479 (Counterclockwise)
Preceding gene: 110679184
Following gene: 110679182
Centisome position: 43.8
GC content: 57.86
Gene sequence:
>693_bases ATGAAGATTGGTATCCTGATCACCGGGCACCCGCCTGAAAACATGATGGAAGGCGGCAGTTACGACCGGTATTTTGAGCG GTTGCTTGAGGGCCACGGCTTTGACATGCAGGGCTGGGCCGTTGTGGATGGCATCTTTCCCGAGAGTGTCACGGAGGCGG ATGGTTGGCTGATCACCGGCTCGAAACATGGCGCTTATGAGCCCCACGACTGGATCCCGCCACTGGAAGACTTCATTCGC GAGGCTTACGCGGCGGGGCGTCCGATGATTGGCGTGTGTTTCGGCCATCAGATCATCGCGCAGGCCATGGGGGGGCGGGT CGAAAAATTCGACAAAGGCTGGTCGGTTGGACTGACTGAATATCAGATGGACGGTCGCACCTATGCGATCAACGCCTGGC ATCAGGATCAGGTTGTAGAACGCCCTGAGAATGCCGAGGTGATCGCCCGTTCAGATTTCTGCGAAAACGCCGGGCTGTTG TACGGTGATCGCATCTGGACCATTCAGCCGCACCCGGAATATGATGCGTCGTTTATCAAGGGGCTGATCGAAACACGCGG GCGCGGCGTTGTGCCCGAGGACCTCTTGGCACGTGCAATGTCCAAGCTCGATCAGCCGAGCGACCGCATGGACGTCGCCA ACAAAATGGCTGCATTTTTCAAGAAAGAGAGGGCCGCATGGCCGACTGGATGA
Upstream 100 bases:
>100_bases GATCCGCAATTTCGTGCTGACCAAACGGCAGGAGTTGAAATACATGGCCGAATTGTCGCCGCAGGAACAGGTCACCATCT ATCTGGACACGGTGTAGAAT
Downstream 100 bases:
>100_bases CAGAACTGCCGGATGCTGCGCGCAGCTATCTGGAGGGGCACCGGCTTGACGAGGTCGAGTGCATCATTTCGGACCTGCCC GGCATTGCGCGCGGCAAGGC
Product: glutamine amidotransferase, class I
Products: NA
Alternate protein names: Glutamine Amidotransferase Class I; Glutamine Amidotransferase; Amidotransferase; GMP Synthase; GMP Synthase Family Protein; Class I Glutamine Amidotransferase; GMP Synthase Glutamine Amidotransferase Subunit; Class I Glutamine Amidotransferase Family Protein; Glutamine Amidotransferase Class-I Family Protein; Guanosine Monophosphate Synthetase; GMP Synthase Subunit A; Glutamine Amidotransferase Class-I Family; Glutamine Amidotransferase Protein; Glutamine-Hydrolyzing GMP Synthase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG
Sequences:
>Translated_230_residues MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG >Mature_230_residues MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323155, Length=229, Percent_Identity=27.9475982532751, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25853; Mature: 25853
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITG CEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEC SKHGAYEPHDWIPPLEDFIREAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTE CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCEE YQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLLYGDRIWTIQPHPEYDASFIK EEECCEEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCCEECCEEEEECCCCCCCHHHHH GLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITG CEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEC SKHGAYEPHDWIPPLEDFIREAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTE CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCEE YQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLLYGDRIWTIQPHPEYDASFIK EEECCEEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCCEECCEEEEECCCCCCCHHHHH GLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA