The gene/protein map for NC_008209 is currently unavailable.
Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110679183

Identifier: 110679183

GI number: 110679183

Start: 1809479

End: 1810171

Strand: Reverse

Name: 110679183

Synonym: RD1_1893

Alternate gene names: NA

Gene position: 1810171-1809479 (Counterclockwise)

Preceding gene: 110679184

Following gene: 110679182

Centisome position: 43.8

GC content: 57.86

Gene sequence:

>693_bases
ATGAAGATTGGTATCCTGATCACCGGGCACCCGCCTGAAAACATGATGGAAGGCGGCAGTTACGACCGGTATTTTGAGCG
GTTGCTTGAGGGCCACGGCTTTGACATGCAGGGCTGGGCCGTTGTGGATGGCATCTTTCCCGAGAGTGTCACGGAGGCGG
ATGGTTGGCTGATCACCGGCTCGAAACATGGCGCTTATGAGCCCCACGACTGGATCCCGCCACTGGAAGACTTCATTCGC
GAGGCTTACGCGGCGGGGCGTCCGATGATTGGCGTGTGTTTCGGCCATCAGATCATCGCGCAGGCCATGGGGGGGCGGGT
CGAAAAATTCGACAAAGGCTGGTCGGTTGGACTGACTGAATATCAGATGGACGGTCGCACCTATGCGATCAACGCCTGGC
ATCAGGATCAGGTTGTAGAACGCCCTGAGAATGCCGAGGTGATCGCCCGTTCAGATTTCTGCGAAAACGCCGGGCTGTTG
TACGGTGATCGCATCTGGACCATTCAGCCGCACCCGGAATATGATGCGTCGTTTATCAAGGGGCTGATCGAAACACGCGG
GCGCGGCGTTGTGCCCGAGGACCTCTTGGCACGTGCAATGTCCAAGCTCGATCAGCCGAGCGACCGCATGGACGTCGCCA
ACAAAATGGCTGCATTTTTCAAGAAAGAGAGGGCCGCATGGCCGACTGGATGA

Upstream 100 bases:

>100_bases
GATCCGCAATTTCGTGCTGACCAAACGGCAGGAGTTGAAATACATGGCCGAATTGTCGCCGCAGGAACAGGTCACCATCT
ATCTGGACACGGTGTAGAAT

Downstream 100 bases:

>100_bases
CAGAACTGCCGGATGCTGCGCGCAGCTATCTGGAGGGGCACCGGCTTGACGAGGTCGAGTGCATCATTTCGGACCTGCCC
GGCATTGCGCGCGGCAAGGC

Product: glutamine amidotransferase, class I

Products: NA

Alternate protein names: Glutamine Amidotransferase Class I; Glutamine Amidotransferase; Amidotransferase; GMP Synthase; GMP Synthase Family Protein; Class I Glutamine Amidotransferase; GMP Synthase Glutamine Amidotransferase Subunit; Class I Glutamine Amidotransferase Family Protein; Glutamine Amidotransferase Class-I Family Protein; Guanosine Monophosphate Synthetase; GMP Synthase Subunit A; Glutamine Amidotransferase Class-I Family; Glutamine Amidotransferase Protein; Glutamine-Hydrolyzing GMP Synthase

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR
EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL
YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG

Sequences:

>Translated_230_residues
MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR
EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL
YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG
>Mature_230_residues
MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITGSKHGAYEPHDWIPPLEDFIR
EAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTEYQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLL
YGDRIWTIQPHPEYDASFIKGLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323155, Length=229, Percent_Identity=27.9475982532751, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25853; Mature: 25853

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITG
CEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
SKHGAYEPHDWIPPLEDFIREAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCEE
YQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLLYGDRIWTIQPHPEYDASFIK
EEECCEEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCCEECCEEEEECCCCCCCHHHHH
GLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG
HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIGILITGHPPENMMEGGSYDRYFERLLEGHGFDMQGWAVVDGIFPESVTEADGWLITG
CEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
SKHGAYEPHDWIPPLEDFIREAYAAGRPMIGVCFGHQIIAQAMGGRVEKFDKGWSVGLTE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCEE
YQMDGRTYAINAWHQDQVVERPENAEVIARSDFCENAGLLYGDRIWTIQPHPEYDASFIK
EEECCEEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCCEECCEEEEECCCCCCCHHHHH
GLIETRGRGVVPEDLLARAMSKLDQPSDRMDVANKMAAFFKKERAAWPTG
HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA