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The map label for this gene is 110679071

Identifier: 110679071

GI number: 110679071

Start: 1697993

End: 1698559

Strand: Reverse

Name: 110679071

Synonym: RD1_1773

Alternate gene names: NA

Gene position: 1698559-1697993 (Counterclockwise)

Preceding gene: 110679075

Following gene: 110679067

Centisome position: 41.1

GC content: 59.96

Gene sequence:

>567_bases
ATGCCGATGCCCCCAAAATCCGTCTGTGTCTATTGCGGATCCCGCCCCGGAACCGACCCCGACTTCCTGCAGGACGCGCA
AAACATCGGCCGCGTGATCGCCGATGAAGGCTGGCGGCTGGTCTATGGCGCAGGCGATGTCGGGCTGATGGGAGCTGTGG
CGCGCGCGGCGCAGGAGGCGGGCGCTGACACCTTTGGCGTGATCCCGCAACTTCTGGTGGATTGGGAAATCGGGAAAACC
GATCTGACCACCTATGTGATCACCGAAACCATGCATGAGCGCAAGAAAGTCATGTTCATGAATTGCGATGCCGTCGTGGT
GCTGCCCGGTGGTGCCGGATCGCTGGATGAGATGTTCGAAGCCCTGACATGGCGGCAACTGGGCCTGCATCAAAAGCCGA
TATTCCTATTGAATACAAACGGATATTGGGACCCGCTGGTATCGCTTCTGCAACATGTGACAGCGCATGGTTTTGCCGAT
GAAACGCTGCACGGGTTCTACACCACCGTGCCCGATGCCGAGGCCTGCCGCCAAGAGCTGCAGCGCGCCTTTGGTCAGGG
CGCCTGA

Upstream 100 bases:

>100_bases
GCGCTCGGATGCGATGCAGACATTGAGCCTACATAGCAACTGCCCTATCACTGGTCAAAACGAATGAAGTCATAAATCCG
CGATTTGAAACAAGAAAGTC

Downstream 100 bases:

>100_bases
CGAACCACCCGACACATCAAGAATCCCGTAGGGCGTTGAACTCCCTGATTGCAGGCAGTGCTTGCGTGATCCAGGTTTTT
CGCATGAGACTTTAGGGGGC

Product: decarboxylase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEAGADTFGVIPQLLVDWEIGKT
DLTTYVITETMHERKKVMFMNCDAVVVLPGGAGSLDEMFEALTWRQLGLHQKPIFLLNTNGYWDPLVSLLQHVTAHGFAD
ETLHGFYTTVPDAEACRQELQRAFGQGA

Sequences:

>Translated_188_residues
MPMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEAGADTFGVIPQLLVDWEIGKT
DLTTYVITETMHERKKVMFMNCDAVVVLPGGAGSLDEMFEALTWRQLGLHQKPIFLLNTNGYWDPLVSLLQHVTAHGFAD
ETLHGFYTTVPDAEACRQELQRAFGQGA
>Mature_187_residues
PMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEAGADTFGVIPQLLVDWEIGKTD
LTTYVITETMHERKKVMFMNCDAVVVLPGGAGSLDEMFEALTWRQLGLHQKPIFLLNTNGYWDPLVSLLQHVTAHGFADE
TLHGFYTTVPDAEACRQELQRAFGQGA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=179, Percent_Identity=36.3128491620112, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20545; Mature: 20413

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEA
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
GADTFGVIPQLLVDWEIGKTDLTTYVITETMHERKKVMFMNCDAVVVLPGGAGSLDEMFE
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHH
ALTWRQLGLHQKPIFLLNTNGYWDPLVSLLQHVTAHGFADETLHGFYTTVPDAEACRQEL
HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH
QRAFGQGA
HHHHCCCC
>Mature Secondary Structure 
PMPPKSVCVYCGSRPGTDPDFLQDAQNIGRVIADEGWRLVYGAGDVGLMGAVARAAQEA
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
GADTFGVIPQLLVDWEIGKTDLTTYVITETMHERKKVMFMNCDAVVVLPGGAGSLDEMFE
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHH
ALTWRQLGLHQKPIFLLNTNGYWDPLVSLLQHVTAHGFADETLHGFYTTVPDAEACRQEL
HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH
QRAFGQGA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]