Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is crcB1 [H]

Identifier: 110679075

GI number: 110679075

Start: 1702694

End: 1703149

Strand: Reverse

Name: crcB1 [H]

Synonym: RD1_1777

Alternate gene names: 110679075

Gene position: 1703149-1702694 (Counterclockwise)

Preceding gene: 110679076

Following gene: 110679071

Centisome position: 41.21

GC content: 63.82

Gene sequence:

>456_bases
ATGCCGAACACTGCCGCCATCGCCGGACTGATCACGATCGTCAGCGCAACCAGCGCTTTTGCCGCCGATCTGATCGAAAA
GACCAGCCCCCATGCCGTCGGCTACACAATCGACCGCCTTGAGGCGGCTGTCACTGGGGCTGGGGCGACGGTTTTTGCGC
GCGTGGACCACGCTGCCGGTGCTGCATCCGTCGATCTGGAGCTTGCGCCCTCGCAACTGCTGATCTTTGGCAACCCCAAA
CTGGGCACGCCCGCAATGCAGGGCGGTGCGACGGCTGGGCTTGATCTGCCCCTGCGGGTTCTGGCCTACGAGGATAACGC
AGGCGTCGTGCATGTGGTCTATCACGACCCGGCCACGCTCGCCGCAACCCACGGCCTGCCTGCGGATGCGAAATACATCC
AGATGATGACCGGCGCGCTGGACAAACTGACCGACAAAGCGGTCGCTGCGCAATAG

Upstream 100 bases:

>100_bases
ACGACGCTGAAGGCCGCCGAATAAGGCACTTCACAGCACTGTGACGAACATCTTGCCAGCGCCGTGCTAGCCTGTGCGCG
ACCATCAAAGGAGAATACCC

Downstream 100 bases:

>100_bases
ATCTTTGGCAACCCATCTGCCGGCCATCTCGCGCGCGGTCGGCAGATGCCCGTCAGAGGTGTTGAAAACTGTTATCGAGG
CACTCGACGATTTCGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPNTAAIAGLITIVSATSAFAADLIEKTSPHAVGYTIDRLEAAVTGAGATVFARVDHAAGAASVDLELAPSQLLIFGNPK
LGTPAMQGGATAGLDLPLRVLAYEDNAGVVHVVYHDPATLAATHGLPADAKYIQMMTGALDKLTDKAVAAQ

Sequences:

>Translated_151_residues
MPNTAAIAGLITIVSATSAFAADLIEKTSPHAVGYTIDRLEAAVTGAGATVFARVDHAAGAASVDLELAPSQLLIFGNPK
LGTPAMQGGATAGLDLPLRVLAYEDNAGVVHVVYHDPATLAATHGLPADAKYIQMMTGALDKLTDKAVAAQ
>Mature_150_residues
PNTAAIAGLITIVSATSAFAADLIEKTSPHAVGYTIDRLEAAVTGAGATVFARVDHAAGAASVDLELAPSQLLIFGNPKL
GTPAMQGGATAGLDLPLRVLAYEDNAGVVHVVYHDPATLAATHGLPADAKYIQMMTGALDKLTDKAVAAQ

Specific function: Unknown

COG id: COG3439

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691
- InterPro:   IPR005180 [H]

Pfam domain/function: PF02537 CRCB; PF03625 DUF302 [H]

EC number: NA

Molecular weight: Translated: 15290; Mature: 15158

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTAAIAGLITIVSATSAFAADLIEKTSPHAVGYTIDRLEAAVTGAGATVFARVDHAAG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCC
AASVDLELAPSQLLIFGNPKLGTPAMQGGATAGLDLPLRVLAYEDNAGVVHVVYHDPATL
CEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCE
AATHGLPADAKYIQMMTGALDKLTDKAVAAQ
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNTAAIAGLITIVSATSAFAADLIEKTSPHAVGYTIDRLEAAVTGAGATVFARVDHAAG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCC
AASVDLELAPSQLLIFGNPKLGTPAMQGGATAGLDLPLRVLAYEDNAGVVHVVYHDPATL
CEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCE
AATHGLPADAKYIQMMTGALDKLTDKAVAAQ
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA