| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is iolG [H]
Identifier: 110679033
GI number: 110679033
Start: 1663275
End: 1664303
Strand: Direct
Name: iolG [H]
Synonym: RD1_1732
Alternate gene names: 110679033
Gene position: 1663275-1664303 (Clockwise)
Preceding gene: 110679032
Following gene: 110679034
Centisome position: 40.24
GC content: 60.54
Gene sequence:
>1029_bases ATGAAAGTGCTTATCGCGGGATTGGGCAACATGGGCAAAAGCCATGCGCTGGCCCATCACCACCACCCAGAGACAGAGAT TGTCGCCCTTGTTAATCGTTCGGCGGTGGATTTGCCCGACGCGCTGCGGGGCTACCCGCTCGATGATGATTTTTATGCGG CGCTGAGCGCCACGCGCCCGGCGCTTGTGGTGATCGCAACCTATACCGACACCCATGCGGATTATGCCATCGCAGCGATG CAGGCGGGGGCGCATGTCTTTGTGGAAAAACCGCTCGCCATGACGGCGCAGGATGCCGCGCGCGTGGTGGACACGGCACG TCGCCTCAAGCGCAAACTTGGCGTCGGCTATATCCTGCGCCATCACCCAAGCTGGACGCGCCTGATCGAGGAGGCGCGTG GCCTTGGCGGGCCATATGTGTTCCGCCTGAACCTCAATCAGCAGTCAGACGGCCCAACCTGGGAGACGCATAAGGCGTTG ATGGAAACGACGTCTCCCTTGGTGGATTGCGGTGTGCATTACGTTGATGTGATGTGTCAGATCACCGATGCGCAGCCGGT GCGGGTGCATGGGATGGGCCTGCGCCTCAGTGATGAAATCGCGCCGGATATGTATAACTACGGCCAGCTTCAGGTCGTGT TTGAGGATGGCTCCGTAGGTTGGTACGAAGCCGGGTGGGGGCCGATGATGTCAGAGACCGCGTTCTTTGTAAAAGACGTG ATCAGCCCCAACGGTGCGGTGTCGATCACCGATGGCAACAAGGGGGCATCCGATGACATTGATGGCCATACCAAAGTCGG CGGGCTGCTCGTGCACCGACCCGGGGGGGACCGCCGGATCGACCTGCCCGATGAACCCGGACACCAGCAACTCTGCGATG CCGAACAAGGCTGGATTGTGGATGCCATCCGGCGCGACGTGGATCTGAGCCGTCATATGAAGGACGCGGTGCAATCGCTG CGCATCTGCCTTGCGGCGGATGAAAGCATTCGCACCGGACAAACAATCAACCTGAGGCCCGGCGCATGA
Upstream 100 bases:
>100_bases CGGTGCTTTCGGCGCTGTCGATGGCGATCCTGCCGGTGATGGTGCTTTATGTGATCTTTTCGCGCCAGTTGATCCGGGGC ATTACATCAGGAGCGGTCAA
Downstream 100 bases:
>100_bases CCGCATTGAAACTTGAGGGTGTCAACAAATCCTTTGGCCCCGTGCATGTTCTCAAAGACATCAACCTGACTGTGGAGGAG GGCGAGTTTGTTGTCTTTGT
Product: oxidoreductase, putative
Products: NA
Alternate protein names: Myo-inositol 2-dehydrogenase; MI 2-dehydrogenase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKVLIAGLGNMGKSHALAHHHHPETEIVALVNRSAVDLPDALRGYPLDDDFYAALSATRPALVVIATYTDTHADYAIAAM QAGAHVFVEKPLAMTAQDAARVVDTARRLKRKLGVGYILRHHPSWTRLIEEARGLGGPYVFRLNLNQQSDGPTWETHKAL METTSPLVDCGVHYVDVMCQITDAQPVRVHGMGLRLSDEIAPDMYNYGQLQVVFEDGSVGWYEAGWGPMMSETAFFVKDV ISPNGAVSITDGNKGASDDIDGHTKVGGLLVHRPGGDRRIDLPDEPGHQQLCDAEQGWIVDAIRRDVDLSRHMKDAVQSL RICLAADESIRTGQTINLRPGA
Sequences:
>Translated_342_residues MKVLIAGLGNMGKSHALAHHHHPETEIVALVNRSAVDLPDALRGYPLDDDFYAALSATRPALVVIATYTDTHADYAIAAM QAGAHVFVEKPLAMTAQDAARVVDTARRLKRKLGVGYILRHHPSWTRLIEEARGLGGPYVFRLNLNQQSDGPTWETHKAL METTSPLVDCGVHYVDVMCQITDAQPVRVHGMGLRLSDEIAPDMYNYGQLQVVFEDGSVGWYEAGWGPMMSETAFFVKDV ISPNGAVSITDGNKGASDDIDGHTKVGGLLVHRPGGDRRIDLPDEPGHQQLCDAEQGWIVDAIRRDVDLSRHMKDAVQSL RICLAADESIRTGQTINLRPGA >Mature_342_residues MKVLIAGLGNMGKSHALAHHHHPETEIVALVNRSAVDLPDALRGYPLDDDFYAALSATRPALVVIATYTDTHADYAIAAM QAGAHVFVEKPLAMTAQDAARVVDTARRLKRKLGVGYILRHHPSWTRLIEEARGLGGPYVFRLNLNQQSDGPTWETHKAL METTSPLVDCGVHYVDVMCQITDAQPVRVHGMGLRLSDEIAPDMYNYGQLQVVFEDGSVGWYEAGWGPMMSETAFFVKDV ISPNGAVSITDGNKGASDDIDGHTKVGGLLVHRPGGDRRIDLPDEPGHQQLCDAEQGWIVDAIRRDVDLSRHMKDAVQSL RICLAADESIRTGQTINLRPGA
Specific function: Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI1787574, Length=184, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.18 [H]
Molecular weight: Translated: 37369; Mature: 37369
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIAGLGNMGKSHALAHHHHPETEIVALVNRSAVDLPDALRGYPLDDDFYAALSATRP CEEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCC ALVVIATYTDTHADYAIAAMQAGAHVFVEKPLAMTAQDAARVVDTARRLKRKLGVGYILR EEEEEEEECCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE HHPSWTRLIEEARGLGGPYVFRLNLNQQSDGPTWETHKALMETTSPLVDCGVHYVDVMCQ CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEE ITDAQPVRVHGMGLRLSDEIAPDMYNYGQLQVVFEDGSVGWYEAGWGPMMSETAFFVKDV ECCCCCEEEEEECEEECHHCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHH ISPNGAVSITDGNKGASDDIDGHTKVGGLLVHRPGGDRRIDLPDEPGHQQLCDAEQGWIV CCCCCEEEEECCCCCCCCCCCCCEEECEEEEECCCCCCEECCCCCCCHHHHCCCCCCEEH DAIRRDVDLSRHMKDAVQSLRICLAADESIRTGQTINLRPGA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCC >Mature Secondary Structure MKVLIAGLGNMGKSHALAHHHHPETEIVALVNRSAVDLPDALRGYPLDDDFYAALSATRP CEEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHCCCC ALVVIATYTDTHADYAIAAMQAGAHVFVEKPLAMTAQDAARVVDTARRLKRKLGVGYILR EEEEEEEECCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE HHPSWTRLIEEARGLGGPYVFRLNLNQQSDGPTWETHKALMETTSPLVDCGVHYVDVMCQ CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEEEEEE ITDAQPVRVHGMGLRLSDEIAPDMYNYGQLQVVFEDGSVGWYEAGWGPMMSETAFFVKDV ECCCCCEEEEEECEEECHHCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHH ISPNGAVSITDGNKGASDDIDGHTKVGGLLVHRPGGDRRIDLPDEPGHQQLCDAEQGWIV CCCCCEEEEECCCCCCCCCCCCCEEECEEEEECCCCCCEECCCCCCCHHHHCCCCCCEEH DAIRRDVDLSRHMKDAVQSLRICLAADESIRTGQTINLRPGA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA