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The map label for this gene is ycjP [C]

Identifier: 110679032

GI number: 110679032

Start: 1662439

End: 1663278

Strand: Direct

Name: ycjP [C]

Synonym: RD1_1731

Alternate gene names: 110679032

Gene position: 1662439-1663278 (Clockwise)

Preceding gene: 110679031

Following gene: 110679033

Centisome position: 40.22

GC content: 56.43

Gene sequence:

>840_bases
ATGACCACCGCGCGCCGCATCTCCGGGACAACGATTGCCGCTCATGCTGTGCTGATGACCTATACGGTGATCGCGCTTTT
CCCGGTGTTCGTCATCCTGATCAACAGCTTCAAGACACGGCGTGCCATCTTTCGGGACCCGCTTGGCCTGCCGAATGAAG
AGACCTTTTCCCTGATCGGGTATCAGACCGTGTTCAGGCAGGGGGATTTCGTGCTCTACTTTCAGAACTCGATGATTGTG
ACGGTTGTGTCCCTGACGCTGATCCTGCTTTTTGGCGCGATGGCGGCCTTTGCGCTTGCTGAATACCGGTTCAAAGGCAA
TACGCTGATGGGGCTTTATCTGGCCCTTGGGATCATGATCCCCATACGGATTGGTACGGTGGCGATCCTTGAAATGATGG
TGTCCACGGGGCTGGTCAACACGCTGGTGGCGCTGATCCTTGTCTATACCGCGCAGGGGTTGCCGTTGGCGGTTTTCATC
CTCAGTGAATTCATGCGCGGGGTGTCGGATGATCTGAAAAACGCAGGGCGGATGGACGGGTTGTCCGAATACCAGATCTT
CTGGCGGTTGGTTTTGCCGCTGGTGCGGCCCGCAATGGCGACTGTTGCGGTCTTTAACATGATCCCGATCTGGAACGATC
TGTGGTTCCCGCTGATCCTTGCCCCCGCAGAAGAGGTAAAAACGCTGACGCTCGGCAGTCAGGTCTTTATCGGGCAGTTC
GTCACGGACTGGAACGCGGTGCTTTCGGCGCTGTCGATGGCGATCCTGCCGGTGATGGTGCTTTATGTGATCTTTTCGCG
CCAGTTGATCCGGGGCATTACATCAGGAGCGGTCAAATGA

Upstream 100 bases:

>100_bases
GCCTCGGCCATGTTCGGCATCATCCTGATCGGCGTGTGCACTTACCTCTTCGGCATTCAGCGCCGCCTGCGCAATTACCA
GTTCTGAGGGGGGCGAGACC

Downstream 100 bases:

>100_bases
AAGTGCTTATCGCGGGATTGGGCAACATGGGCAAAAGCCATGCGCTGGCCCATCACCACCACCCAGAGACAGAGATTGTC
GCCCTTGTTAATCGTTCGGC

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTTARRISGTTIAAHAVLMTYTVIALFPVFVILINSFKTRRAIFRDPLGLPNEETFSLIGYQTVFRQGDFVLYFQNSMIV
TVVSLTLILLFGAMAAFALAEYRFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLVALILVYTAQGLPLAVFI
LSEFMRGVSDDLKNAGRMDGLSEYQIFWRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEEVKTLTLGSQVFIGQF
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK

Sequences:

>Translated_279_residues
MTTARRISGTTIAAHAVLMTYTVIALFPVFVILINSFKTRRAIFRDPLGLPNEETFSLIGYQTVFRQGDFVLYFQNSMIV
TVVSLTLILLFGAMAAFALAEYRFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLVALILVYTAQGLPLAVFI
LSEFMRGVSDDLKNAGRMDGLSEYQIFWRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEEVKTLTLGSQVFIGQF
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
>Mature_278_residues
TTARRISGTTIAAHAVLMTYTVIALFPVFVILINSFKTRRAIFRDPLGLPNEETFSLIGYQTVFRQGDFVLYFQNSMIVT
VVSLTLILLFGAMAAFALAEYRFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLVALILVYTAQGLPLAVFIL
SEFMRGVSDDLKNAGRMDGLSEYQIFWRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEEVKTLTLGSQVFIGQFV
TDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=287, Percent_Identity=31.7073170731707, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1789860, Length=276, Percent_Identity=24.2753623188406, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=25.1162790697674, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30861; Mature: 30729

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTARRISGTTIAAHAVLMTYTVIALFPVFVILINSFKTRRAIFRDPLGLPNEETFSLIG
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YQTVFRQGDFVLYFQNSMIVTVVSLTLILLFGAMAAFALAEYRFKGNTLMGLYLALGIMI
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PIRIGTVAILEMMVSTGLVNTLVALILVYTAQGLPLAVFILSEFMRGVSDDLKNAGRMDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LSEYQIFWRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEEVKTLTLGSQVFIGQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTARRISGTTIAAHAVLMTYTVIALFPVFVILINSFKTRRAIFRDPLGLPNEETFSLIG
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YQTVFRQGDFVLYFQNSMIVTVVSLTLILLFGAMAAFALAEYRFKGNTLMGLYLALGIMI
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PIRIGTVAILEMMVSTGLVNTLVALILVYTAQGLPLAVFILSEFMRGVSDDLKNAGRMDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LSEYQIFWRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEEVKTLTLGSQVFIGQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHH
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]