| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is argK [C]
Identifier: 110678982
GI number: 110678982
Start: 1616365
End: 1617354
Strand: Direct
Name: argK [C]
Synonym: RD1_1679
Alternate gene names: 110678982
Gene position: 1616365-1617354 (Clockwise)
Preceding gene: 110678980
Following gene: 110678983
Centisome position: 39.11
GC content: 64.34
Gene sequence:
>990_bases ATGGAGACGGCGCAGCTGGCGGCAGGCATCATAAAGGGCGAACGTCGTGCCTTGGCGCGGGGAATCACCCTGGTGGAAAG TGCGCGCGAGGATCACCGGGTGCAGGCCAGCGCCCTGTTGCAGCACCTGCCCCGGGACCGGCAGGCGCTGCGTATCGGGC TGTCGGGCACGCCGGGCGTCGGAAAATCCACCTTTGTCGAAAGCTTTGGCATGATGCTGGTGGAAAAGGGCCTGCGGGTC GCCGTTCTGGCGGTTGATCCGTCATCGTCCCGCTCGGGCGGGTCGATCCTTGGGGATAAAACACGGATGGACCGGCTGGC CCGTGCGCCCAACGCCTTCATCCGCCCCTCGCCGAGCCAGACGCACCTTGGTGGCGTGGCGCGGCGCACGCGCGAGGCGG TTGCGTTGTGCGAGGCGGCGGGGTTTGATGTGGTTTTGATCGAAACCGTGGGCGTGGGGCAATCCGAAACCGTGGTTGCG GAAATTTCCGATCTCTTTCTGCTCTTGCTGGCCCCGGCGGGCGGGGATGAATTGCAGGGCGTCAAACGCGGAATCATGGA GATCGCGGATATGATTCTGATCAACAAGGCGGACGGGGATCTCAAGCCTGCGGCAACGCGGACCTGTGCGGATTATGCGG GGGCCTTGCGGCTTTTGCGCAAGCGGCCACAGGATCCCGATGGATTTCCCAAGGCGGCCATGGTGTCGGCCCTCAACAGC ATAGGTCTGGCCGATGTCTGGGGCGATATCGAAACGCTGACCGCATGGCGGCGCGCGCAGGGGTTTTGGGACCGCACCCG CGCTGCTCAGGCGCGCTACTGGTTTGGTCAGGACGTGCGCAACGCCCTGCTTGAACAGTTGGAAACCCCGAAGGCACGCG CGGCCTTGCAGTCCTTTGGCGACAAGGTCGCAGCTGGTGAGATGCCCCCTTCTGTCGCCGCACAGTCGTTTTTGCAGGGT CTTGAGCGGCGCGAGGGATCAAAGTCGTGA
Upstream 100 bases:
>100_bases AGGACATGTGGCCTCTTAGCCCATGGGTGCAGGCGCGCCAAGCACTGGACATTTCCCGGCGGCTGCCGGAAAACCATCGG GGAACAAAAGGGCAGGGCAT
Downstream 100 bases:
>100_bases TTTTGCGCCCGGCTTGGGTTGACCGGACGTGCGATTCCCACTAAAGCCAGCGAACGAATTTCCGGGGTTCGGCGTGACGC CAGCCCCTTTGTCGTTTACC
Product: arginine/ornithine transport system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG LERREGSKS
Sequences:
>Translated_329_residues METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG LERREGSKS >Mature_329_residues METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG LERREGSKS
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=333, Percent_Identity=46.5465465465465, Blast_Score=284, Evalue=8e-77, Organism=Escherichia coli, GI1789285, Length=277, Percent_Identity=48.014440433213, Blast_Score=251, Evalue=6e-68, Organism=Caenorhabditis elegans, GI71994271, Length=328, Percent_Identity=41.1585365853659, Blast_Score=245, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71994275, Length=277, Percent_Identity=42.9602888086643, Blast_Score=229, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 35266; Mature: 35266
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCC GKSTFVESFGMMLVEKGLRVAVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQ CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC THLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVAEISDLFLLLLAPAGGDELQG HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH VKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFG CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC DKVAAGEMPPSVAAQSFLQGLERREGSKS CHHCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCC GKSTFVESFGMMLVEKGLRVAVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQ CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC THLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVAEISDLFLLLLAPAGGDELQG HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH VKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFG CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC DKVAAGEMPPSVAAQSFLQGLERREGSKS CHHCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]