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The map label for this gene is 110678975

Identifier: 110678975

GI number: 110678975

Start: 1606148

End: 1607488

Strand: Reverse

Name: 110678975

Synonym: RD1_1671

Alternate gene names: NA

Gene position: 1607488-1606148 (Counterclockwise)

Preceding gene: 110678976

Following gene: 110678974

Centisome position: 38.89

GC content: 62.64

Gene sequence:

>1341_bases
ATGAATTTCGATATTTGCCAAAGCCCGGTGTCCCTGTCGACCCCCGAAGCGGTCGAGGACTGGAACGGCATGATCCGCGC
CTTTTTGGCCCACGGAACTGCAACACCGACCTATCTTGGTGCCGTCATGACGGCAGAGCCCGATTTCGCCATGGGTCATG
CGGCGCGGGGGATTTTTTCGCTCATGATGGGGCGACGCGAATTGGTTCAGACGGCGCGGGAAGCGCTGCAGGCCGCCCGC
ATGTGCGACGCCAAAACCCCGCGAGACCGCGCATGGGTAGACGCGCTTGACGCGTGGCTGGCCGGGCGACCCTCTGACGC
TGTTGGCGCGATGGAACGCGCGATGCGTACTTATCCGACTGATACGCTATCGGCAAAGGTCAGCCATGGGATCCGGTTCA
TCATGGGCGACGCCCCTGGCATGCGCCGGTCCATCGAACGGGTTCTGGCCGCGCATGATGCGGATCACCCGCTGCGCGGT
TTTATCCTTGGGTGCCACGCCTTCACGCTGGAAGAGACCGGCGAGTATGACCGCGCCGAAGAGGCCGGTCGCGCCGGGCT
TGAACTTGCGCCCGATGATGCCTGGGGCCTGCACGCCGTGGCGCATGTTTTCGATATGACCGCGCGCCCGGATCTGGGCA
TCGATCTGATCGAAGGCAATACCGCTGCCTGGGATCATTGCAACAACTTCAGATATCACGTGTGGTGGCACAAGGCGCTC
CTGCATATGGATCGCGGCGAGTTCGACGTGGCACTGGGCCTTTATGACGCGCAGGTCAGATCGGACAAGACCGATGATTA
CCGGGACATATCCAATGCAACGTCGCTTTTGCTGCGCCTTGAGTTGGAGGGAATGGACGTTGGCCCCCGCTGGGCCGAAC
TGGCCGATATCGCCGAACGCCGCACCGAGGATGGCTGCGTCGTCTTTGCCGATCTGCATTATATGCTGGCGCTGGCCGGT
GCGGCCCGCCCGGAGGCACAACGCGCCATGGCCGCACGATTTGCGCGTGACGCGCGCTGTGACGGGGAAATGTCCCTGCG
CTATGCCGATCCCGGTGTGGCGGCGGCATCAGGACTGAATGCCTTTGCCGAAGGGCGCTATGAGGCCGCTTTCAGTGATC
TCGCCGCAGCACGTCCAAACATGCAAACCATTGGCGGCAGCCACGCACAGCGCGATGTTTTCGAACGTTTGACCATTGAT
GCCGGGCTGCGCGCCGGACGCTATGAGCAGACAGAACGGATCCTGCGCGCGCGCCTGAAACAGCGGGCCGGACAAGCAGA
CAGGTTCAGCAAAACGCGTCTGGCAGCCATTGAGGACGCCCGGCGGATCCCTGCCCAATAA

Upstream 100 bases:

>100_bases
CACATGCATTCACGTTGGCGTGTAACTTTTGCGCGACCCCTTCGCACCGTGCAGTTTTTCGATAAACAGAATGCGACATG
TGTAAAAAGGTGCGTTTTCA

Downstream 100 bases:

>100_bases
AAGCGCCGCCCTGATGACAAATCTCAACAGACGACATAAAGACGCGCCATGACACTTGCCGATGCCTCCAACATCTCTGC
CGCGCGCGACGACGCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNFDICQSPVSLSTPEAVEDWNGMIRAFLAHGTATPTYLGAVMTAEPDFAMGHAARGIFSLMMGRRELVQTAREALQAAR
MCDAKTPRDRAWVDALDAWLAGRPSDAVGAMERAMRTYPTDTLSAKVSHGIRFIMGDAPGMRRSIERVLAAHDADHPLRG
FILGCHAFTLEETGEYDRAEEAGRAGLELAPDDAWGLHAVAHVFDMTARPDLGIDLIEGNTAAWDHCNNFRYHVWWHKAL
LHMDRGEFDVALGLYDAQVRSDKTDDYRDISNATSLLLRLELEGMDVGPRWAELADIAERRTEDGCVVFADLHYMLALAG
AARPEAQRAMAARFARDARCDGEMSLRYADPGVAAASGLNAFAEGRYEAAFSDLAAARPNMQTIGGSHAQRDVFERLTID
AGLRAGRYEQTERILRARLKQRAGQADRFSKTRLAAIEDARRIPAQ

Sequences:

>Translated_446_residues
MNFDICQSPVSLSTPEAVEDWNGMIRAFLAHGTATPTYLGAVMTAEPDFAMGHAARGIFSLMMGRRELVQTAREALQAAR
MCDAKTPRDRAWVDALDAWLAGRPSDAVGAMERAMRTYPTDTLSAKVSHGIRFIMGDAPGMRRSIERVLAAHDADHPLRG
FILGCHAFTLEETGEYDRAEEAGRAGLELAPDDAWGLHAVAHVFDMTARPDLGIDLIEGNTAAWDHCNNFRYHVWWHKAL
LHMDRGEFDVALGLYDAQVRSDKTDDYRDISNATSLLLRLELEGMDVGPRWAELADIAERRTEDGCVVFADLHYMLALAG
AARPEAQRAMAARFARDARCDGEMSLRYADPGVAAASGLNAFAEGRYEAAFSDLAAARPNMQTIGGSHAQRDVFERLTID
AGLRAGRYEQTERILRARLKQRAGQADRFSKTRLAAIEDARRIPAQ
>Mature_446_residues
MNFDICQSPVSLSTPEAVEDWNGMIRAFLAHGTATPTYLGAVMTAEPDFAMGHAARGIFSLMMGRRELVQTAREALQAAR
MCDAKTPRDRAWVDALDAWLAGRPSDAVGAMERAMRTYPTDTLSAKVSHGIRFIMGDAPGMRRSIERVLAAHDADHPLRG
FILGCHAFTLEETGEYDRAEEAGRAGLELAPDDAWGLHAVAHVFDMTARPDLGIDLIEGNTAAWDHCNNFRYHVWWHKAL
LHMDRGEFDVALGLYDAQVRSDKTDDYRDISNATSLLLRLELEGMDVGPRWAELADIAERRTEDGCVVFADLHYMLALAG
AARPEAQRAMAARFARDARCDGEMSLRYADPGVAAASGLNAFAEGRYEAAFSDLAAARPNMQTIGGSHAQRDVFERLTID
AGLRAGRYEQTERILRARLKQRAGQADRFSKTRLAAIEDARRIPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI116812608, Length=377, Percent_Identity=29.973474801061, Blast_Score=191, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI32564653, Length=309, Percent_Identity=31.7152103559871, Blast_Score=165, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17537551, Length=309, Percent_Identity=29.4498381877023, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49236; Mature: 49236

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDICQSPVSLSTPEAVEDWNGMIRAFLAHGTATPTYLGAVMTAEPDFAMGHAARGIFS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHHHHHH
LMMGRRELVQTAREALQAARMCDAKTPRDRAWVDALDAWLAGRPSDAVGAMERAMRTYPT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DTLSAKVSHGIRFIMGDAPGMRRSIERVLAAHDADHPLRGFILGCHAFTLEETGEYDRAE
HHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEHHCCCCCHHH
EAGRAGLELAPDDAWGLHAVAHVFDMTARPDLGIDLIEGNTAAWDHCNNFRYHVWWHKAL
HHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCCCEEEEEHHHHH
LHMDRGEFDVALGLYDAQVRSDKTDDYRDISNATSLLLRLELEGMDVGPRWAELADIAER
HHCCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHH
RTEDGCVVFADLHYMLALAGAARPEAQRAMAARFARDARCDGEMSLRYADPGVAAASGLN
CCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCH
AFAEGRYEAAFSDLAAARPNMQTIGGSHAQRDVFERLTIDAGLRAGRYEQTERILRARLK
HHHCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QRAGQADRFSKTRLAAIEDARRIPAQ
HHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFDICQSPVSLSTPEAVEDWNGMIRAFLAHGTATPTYLGAVMTAEPDFAMGHAARGIFS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHHHHHH
LMMGRRELVQTAREALQAARMCDAKTPRDRAWVDALDAWLAGRPSDAVGAMERAMRTYPT
HHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DTLSAKVSHGIRFIMGDAPGMRRSIERVLAAHDADHPLRGFILGCHAFTLEETGEYDRAE
HHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEHHCCCCCHHH
EAGRAGLELAPDDAWGLHAVAHVFDMTARPDLGIDLIEGNTAAWDHCNNFRYHVWWHKAL
HHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCCCEEEEEHHHHH
LHMDRGEFDVALGLYDAQVRSDKTDDYRDISNATSLLLRLELEGMDVGPRWAELADIAER
HHCCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHH
RTEDGCVVFADLHYMLALAGAARPEAQRAMAARFARDARCDGEMSLRYADPGVAAASGLN
CCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCH
AFAEGRYEAAFSDLAAARPNMQTIGGSHAQRDVFERLTIDAGLRAGRYEQTERILRARLK
HHHCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QRAGQADRFSKTRLAAIEDARRIPAQ
HHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA