| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is rimI [C]
Identifier: 110678953
GI number: 110678953
Start: 1588046
End: 1588477
Strand: Reverse
Name: rimI [C]
Synonym: RD1_1648
Alternate gene names: 110678953
Gene position: 1588477-1588046 (Counterclockwise)
Preceding gene: 110678954
Following gene: 110678952
Centisome position: 38.43
GC content: 62.27
Gene sequence:
>432_bases ATGACGCCCTCGGTCCTCGCGCAGCTTCACAAGGTGGCTTTCGCCCCGGAGCGCGGGTGGAGGGCTGATGAGTTCGACAC CCTCTGCGCATCCCCGCATGTCGATCTTTTTACACAGAACAACGGGTTTGCCCTGACGCGCACCGTCGCGGGGGAAACGG AACTCCTGACCCTCGCGGTCCATCCTGAATACCGTCGGCGCGGGATCGCTGATGCCCTGCTGAAAACATGGCTCGTTTCG GTTGAGGCGGACGCGGCATTTCTGGACGTCGCAGCAGATAATGAAGCCGCACACGCCCTTTACGTCAAACATGGATTCGC CGTCACCGGGCGGCGCACAGCCTATTACGCGCGCGCAGATGGCGCCAATGCGGACGCGCTGCTCATGAGACGCGAATTGA CCCGTCGTAAGGGGGCTGAATCACCGGCCTGA
Upstream 100 bases:
>100_bases CAGCCAAGCGACGCAATGAAACGCCTGAGCGCCCCGCACCCTTCTACATCAGGCCCGCGGATGCGGCACCTGCAAAAGAC GCCCCCCCCATGATCCTGAC
Downstream 100 bases:
>100_bases AGGACAAAAACCGGTTGACCCGGCCAATGCCTTAGGCCCTAAATTGGGCAGGATCAGAAATCATCTGCTCAACAAGAGCG GTGGCAGGGTGATGCCCATG
Product: ribosomal-protein-alanine acetyltransferase, putative
Products: CoA; ribosomal-protein N-acetyl-L-alanine
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Ribosomal-Protein-Alanine N-Acetyltransferase; Acetyltransferase GNAT Family; Ribosomal-Protein-Alanine N-Acetyltransferase Protein; Ribosomal-Protein-S18-Alanine Acetyltransferase; Ribosomal Protein Alanine Acetyltransferase
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTPSVLAQLHKVAFAPERGWRADEFDTLCASPHVDLFTQNNGFALTRTVAGETELLTLAVHPEYRRRGIADALLKTWLVS VEADAAFLDVAADNEAAHALYVKHGFAVTGRRTAYYARADGANADALLMRRELTRRKGAESPA
Sequences:
>Translated_143_residues MTPSVLAQLHKVAFAPERGWRADEFDTLCASPHVDLFTQNNGFALTRTVAGETELLTLAVHPEYRRRGIADALLKTWLVS VEADAAFLDVAADNEAAHALYVKHGFAVTGRRTAYYARADGANADALLMRRELTRRKGAESPA >Mature_142_residues TPSVLAQLHKVAFAPERGWRADEFDTLCASPHVDLFTQNNGFALTRTVAGETELLTLAVHPEYRRRGIADALLKTWLVSV EADAAFLDVAADNEAAHALYVKHGFAVTGRRTAYYARADGANADALLMRRELTRRKGAESPA
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128
Molecular weight: Translated: 15668; Mature: 15537
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSVLAQLHKVAFAPERGWRADEFDTLCASPHVDLFTQNNGFALTRTVAGETELLTLAV CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEEE HPEYRRRGIADALLKTWLVSVEADAAFLDVAADNEAAHALYVKHGFAVTGRRTAYYARAD CCHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCEEEECCCEEEEEECC GANADALLMRRELTRRKGAESPA CCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPSVLAQLHKVAFAPERGWRADEFDTLCASPHVDLFTQNNGFALTRTVAGETELLTLAV CHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEEE HPEYRRRGIADALLKTWLVSVEADAAFLDVAADNEAAHALYVKHGFAVTGRRTAYYARAD CCHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCEEEECCCEEEEEECC GANADALLMRRELTRRKGAESPA CCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; ribosomal-protein L-alanine
Specific reaction: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA