Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yeaZ [C]

Identifier: 110678954

GI number: 110678954

Start: 1588474

End: 1589088

Strand: Reverse

Name: yeaZ [C]

Synonym: RD1_1649

Alternate gene names: 110678954

Gene position: 1589088-1588474 (Counterclockwise)

Preceding gene: 110678955

Following gene: 110678953

Centisome position: 38.45

GC content: 65.2

Gene sequence:

>615_bases
GTGACAAGCGCGCCCGTTGTCCTCGCCTTTGATACCGCGTCGGCGTGCTGCGCTGTGGCTGTGATCCGCGGTGATCACTT
GCTCGCCACACGGGTTGAACCGATGACCAAGGGACAGGCGGAACGCCTGCTTGTGATCTGTGAGGAGCTTCTCGCCGAAG
CCGGCATTTCGCTGCCCGAGGTCGATGTGATCGGCGTGGGCACCGGCCCCGGAAATTTCACAGGAATTCGCATATCGGTA
TCTGCGGCGCGCGGGCTGGCGCTGGGGCTTGGGGTGCCGGCCGTGGGCGTGACGGCGTTCGACGCCTTGGGATACGGGCA
AACACCCCCTTTTGCCTGCGCCATCGACGCGCGGCGCGACCATGTGTATTTTCAAAGCACCGCAAAGGATGGCAGCGCGC
GTGATGCCGCCCTCTTCCATCATGCGGAATGTCCGACCCACGAGGGCCCGCTGATCGGCGCGGGTGGCGATGCGGCCGCG
GTGCCCACGGCGGTGGCTATCGCGCATATTGCAGCCAAGCGACGCAATGAAACGCCTGAGCGCCCCGCACCCTTCTACAT
CAGGCCCGCGGATGCGGCACCTGCAAAAGACGCCCCCCCCATGATCCTGACATGA

Upstream 100 bases:

>100_bases
CTGCTGCGTCACTATATCCCCGAAGTGACCGAGGTGCGCCCGGTCGCTACCTGACACCGGACGCAGCCTACCCGCCCCGA
AATCACTGAAAGACCTGACA

Downstream 100 bases:

>100_bases
CGCCCTCGGTCCTCGCGCAGCTTCACAAGGTGGCTTTCGCCCCGGAGCGCGGGTGGAGGGCTGATGAGTTCGACACCCTC
TGCGCATCCCCGCATGTCGA

Product: glycoprotease family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTSAPVVLAFDTASACCAVAVIRGDHLLATRVEPMTKGQAERLLVICEELLAEAGISLPEVDVIGVGTGPGNFTGIRISV
SAARGLALGLGVPAVGVTAFDALGYGQTPPFACAIDARRDHVYFQSTAKDGSARDAALFHHAECPTHEGPLIGAGGDAAA
VPTAVAIAHIAAKRRNETPERPAPFYIRPADAAPAKDAPPMILT

Sequences:

>Translated_204_residues
MTSAPVVLAFDTASACCAVAVIRGDHLLATRVEPMTKGQAERLLVICEELLAEAGISLPEVDVIGVGTGPGNFTGIRISV
SAARGLALGLGVPAVGVTAFDALGYGQTPPFACAIDARRDHVYFQSTAKDGSARDAALFHHAECPTHEGPLIGAGGDAAA
VPTAVAIAHIAAKRRNETPERPAPFYIRPADAAPAKDAPPMILT
>Mature_203_residues
TSAPVVLAFDTASACCAVAVIRGDHLLATRVEPMTKGQAERLLVICEELLAEAGISLPEVDVIGVGTGPGNFTGIRISVS
AARGLALGLGVPAVGVTAFDALGYGQTPPFACAIDARRDHVYFQSTAKDGSARDAALFHHAECPTHEGPLIGAGGDAAAV
PTAVAIAHIAAKRRNETPERPAPFYIRPADAAPAKDAPPMILT

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=142, Percent_Identity=31.6901408450704, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 20899; Mature: 20768

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAPVVLAFDTASACCAVAVIRGDHLLATRVEPMTKGQAERLLVICEELLAEAGISLPE
CCCCCEEEEECCCCHHEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
VDVIGVGTGPGNFTGIRISVSAARGLALGLGVPAVGVTAFDALGYGQTPPFACAIDARRD
EEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCC
HVYFQSTAKDGSARDAALFHHAECPTHEGPLIGAGGDAAAVPTAVAIAHIAAKRRNETPE
EEEEEECCCCCCCCCCEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
RPAPFYIRPADAAPAKDAPPMILT
CCCCEEEECCCCCCCCCCCCEEEC
>Mature Secondary Structure 
TSAPVVLAFDTASACCAVAVIRGDHLLATRVEPMTKGQAERLLVICEELLAEAGISLPE
CCCCEEEEECCCCHHEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
VDVIGVGTGPGNFTGIRISVSAARGLALGLGVPAVGVTAFDALGYGQTPPFACAIDARRD
EEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCC
HVYFQSTAKDGSARDAALFHHAECPTHEGPLIGAGGDAAAVPTAVAIAHIAAKRRNETPE
EEEEEECCCCCCCCCCEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCC
RPAPFYIRPADAAPAKDAPPMILT
CCCCEEEECCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]