Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 110678949

GI number: 110678949

Start: 1583291

End: 1584259

Strand: Reverse

Name: yufQ [H]

Synonym: RD1_1643

Alternate gene names: 110678949

Gene position: 1584259-1583291 (Counterclockwise)

Preceding gene: 110678950

Following gene: 110678948

Centisome position: 38.33

GC content: 61.09

Gene sequence:

>969_bases
ATGGATTTCCTCACTCTCATTCAATTGCTCGACAGTACCGTGCGCCTTGCAACGCCGCTGCTGCTGGCCTGTCTTGCGGG
GTTGTTTTCGGAACGCGCTGGCATTTTCGATATCGGGCTTGAAGGCAAGATGCTGGCGGCTGCTTTCTTTTCCGCCGCTA
TCGCGGCGATCACCGGCTCGGTCTGGCTGGGCCTGATGGCGGGGATTGCGGCGTCCATGACGCTCAGCTTGCTGCACGGC
GTCGCCTCCATCACTTTTCGCGGCAATCAGCTTATTTCCGGTGTGGCGATCAATTTCCTCGCTGCCGGGCTGACGGTCCT
GATCGCGCAGGACTGGTTTCAGCAAGGGGGGCGCACGCCATCGCTCATGGGCGGTGCGCGGTTCGAGCCGATCACCCTGC
CCTTTGCCGATGCGCTGGCAAGCGTTCCGTTGCTTGGCCCGATTTACGGCGAATTGATCTCGGGTCATTCGATCCTTGTC
TATCTGGCTTTTGCAACCGTGCCCCTGACGTGGTGGGTCCTCTACCGCACGCGTTTCGGGCTGCGCCTGCGCGCGGTGGG
CGAAAATCCTGCGGCGGTAGATACCGCAGGCGTATCCGTTGTCGGTTTGCGCTACGCGGCTGTGCTGATTTGCGGCGTCC
TGTGCGGCATCGCGGGGGCATACCTCTCGACCGCGCTGCAGGCCGGTTTTGTCAAGGACATGTCAGCCGGGCGTGGTTTC
ATCGCGCTTGCCGCGCTGATCTTTGCGAAATGGCGCCCGTGGTATGCGCTTTATGCCACGCTGCTGTTTGGGCTTTTCGG
CGCGTTGGAAACGCGACCAGACGTCATTCAGGCGGTGATTGGCATCAAGGTACAGGGGCAAATCCTCGGCGCACTGCCCT
ACATCATGACGGTCATCATTCTGGCGGGTTTTGTCGGCAAGGCCATTCCCCCACGTGCGGGCGGCCAACCCTATGTAAAG
GAACGCTAG

Upstream 100 bases:

>100_bases
TCATTCAGGCGCTTGTCATCCTGTTTACCGGCGCGCTCGATAACATGGTGCGCATGCCGCTGGAGCGTATTTTCCTGATG
CTGCAGCGGGGGAAAGCGTG

Downstream 100 bases:

>100_bases
CCACATAAGGCCAGTTTTCAAAATTTCATCAGTCCTGATGCGTCCAGAGGCCCGCTAAGCATTGATTTTGCATGGCCCTG
CGCCTAAACGAGGTCATGCA

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDFLTLIQLLDSTVRLATPLLLACLAGLFSERAGIFDIGLEGKMLAAAFFSAAIAAITGSVWLGLMAGIAASMTLSLLHG
VASITFRGNQLISGVAINFLAAGLTVLIAQDWFQQGGRTPSLMGGARFEPITLPFADALASVPLLGPIYGELISGHSILV
YLAFATVPLTWWVLYRTRFGLRLRAVGENPAAVDTAGVSVVGLRYAAVLICGVLCGIAGAYLSTALQAGFVKDMSAGRGF
IALAALIFAKWRPWYALYATLLFGLFGALETRPDVIQAVIGIKVQGQILGALPYIMTVIILAGFVGKAIPPRAGGQPYVK
ER

Sequences:

>Translated_322_residues
MDFLTLIQLLDSTVRLATPLLLACLAGLFSERAGIFDIGLEGKMLAAAFFSAAIAAITGSVWLGLMAGIAASMTLSLLHG
VASITFRGNQLISGVAINFLAAGLTVLIAQDWFQQGGRTPSLMGGARFEPITLPFADALASVPLLGPIYGELISGHSILV
YLAFATVPLTWWVLYRTRFGLRLRAVGENPAAVDTAGVSVVGLRYAAVLICGVLCGIAGAYLSTALQAGFVKDMSAGRGF
IALAALIFAKWRPWYALYATLLFGLFGALETRPDVIQAVIGIKVQGQILGALPYIMTVIILAGFVGKAIPPRAGGQPYVK
ER
>Mature_322_residues
MDFLTLIQLLDSTVRLATPLLLACLAGLFSERAGIFDIGLEGKMLAAAFFSAAIAAITGSVWLGLMAGIAASMTLSLLHG
VASITFRGNQLISGVAINFLAAGLTVLIAQDWFQQGGRTPSLMGGARFEPITLPFADALASVPLLGPIYGELISGHSILV
YLAFATVPLTWWVLYRTRFGLRLRAVGENPAAVDTAGVSVVGLRYAAVLICGVLCGIAGAYLSTALQAGFVKDMSAGRGF
IALAALIFAKWRPWYALYATLLFGLFGALETRPDVIQAVIGIKVQGQILGALPYIMTVIILAGFVGKAIPPRAGGQPYVK
ER

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33877; Mature: 33877

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLTLIQLLDSTVRLATPLLLACLAGLFSERAGIFDIGLEGKMLAAAFFSAAIAAITGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
VWLGLMAGIAASMTLSLLHGVASITFRGNQLISGVAINFLAAGLTVLIAQDWFQQGGRTP
HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLMGGARFEPITLPFADALASVPLLGPIYGELISGHSILVYLAFATVPLTWWVLYRTRFG
CCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
LRLRAVGENPAAVDTAGVSVVGLRYAAVLICGVLCGIAGAYLSTALQAGFVKDMSAGRGF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IALAALIFAKWRPWYALYATLLFGLFGALETRPDVIQAVIGIKVQGQILGALPYIMTVII
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEECHHHHHHHHHHHHHHH
LAGFVGKAIPPRAGGQPYVKER
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFLTLIQLLDSTVRLATPLLLACLAGLFSERAGIFDIGLEGKMLAAAFFSAAIAAITGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
VWLGLMAGIAASMTLSLLHGVASITFRGNQLISGVAINFLAAGLTVLIAQDWFQQGGRTP
HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLMGGARFEPITLPFADALASVPLLGPIYGELISGHSILVYLAFATVPLTWWVLYRTRFG
CCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
LRLRAVGENPAAVDTAGVSVVGLRYAAVLICGVLCGIAGAYLSTALQAGFVKDMSAGRGF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IALAALIFAKWRPWYALYATLLFGLFGALETRPDVIQAVIGIKVQGQILGALPYIMTVII
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEECHHHHHHHHHHHHHHH
LAGFVGKAIPPRAGGQPYVKER
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]