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The map label for this gene is yjnA [H]

Identifier: 110678948

GI number: 110678948

Start: 1582281

End: 1583219

Strand: Reverse

Name: yjnA [H]

Synonym: RD1_1642

Alternate gene names: 110678948

Gene position: 1583219-1582281 (Counterclockwise)

Preceding gene: 110678949

Following gene: 110678947

Centisome position: 38.31

GC content: 56.44

Gene sequence:

>939_bases
ATGGCCCTGCGCCTAAACGAGGTCATGCAAATCTACCTCCCCATCGCCGAAGTGTCGGTCAACGCCTTCCTGCTGCTAGG
CCTTGGCGGCATCGTGGGCATTTTGTCGGGAATGTTCGGAGTCGGCGGCGGATTTCTGATGACACCGCTGCTCTTTTTCA
TCGGCATTCCACCGGCTGTTGCCGTGGCGACCGAAGCAAACCAGATTGTCGCCTCGTCGTTTTCCGGCGTTCTGGCGCAC
CTCAAACGCAAGACCGTAGACCTCAAGATGGGAACGGTGCTCTTGATCGGCGGCCTTGCCGGGGCCGCTGTGGGGGTCGT
GATTTTCAACTACCTCAAAGCGCAGGGCCAGGTCGATCTGCTGGTCAAGCTGTGCTACGTTGTTTTCCTTGGCGTGATCG
GCGGGCTGATGTTTATCGAAAGCCTCAATGCGATCCGCAATACCAAGAAGGGCAAGCCGCCCGCACGTAAAAAACACAAC
TGGATCCATGGGTTACCGTTCAAAATGCGGTTCCGGGTCTCGGGTCTATACATCTCGGTCATCCCACCGTTGATTGTTGG
CCTTTGTGTTGGGATTCTGGCGGCCATCATGGGGGTGGGTGGTGGTTTCATCATGGTGCCTGCCATGATCTATCTGCTTG
GCATGCCAACCAAGGTTGTTGTCGGCACCTCCCTCTTTCAGATCATCTTCGTGACCGCCTTCACCACGCTTTTGCATGCG
ACCACCAATTTTACCGTAGATATCGTACTGGCTGTTTTGCTGCTGATTGGTGGCGTGATCGGCGCACAGGTGGGCACGCG
CATCGGCGTGAAGCTCAAGGCGGAACAGCTGCGCATCCTGCTCGCCATTATGGTTCTTGCTGTCTGTGGGAAACTGGCGC
TTGATCTGCTTCTGATGCCTTCGGAGCTGTATTCCATCGGCGCAAGCGCGGGTCATTGA

Upstream 100 bases:

>100_bases
GCGGCCAACCCTATGTAAAGGAACGCTAGCCACATAAGGCCAGTTTTCAAAATTTCATCAGTCCTGATGCGTCCAGAGGC
CCGCTAAGCATTGATTTTGC

Downstream 100 bases:

>100_bases
AAATGCTCGCACGCCTTTTGACCCTGATCGCTTTTGCTGCACTGGCAATGACAGCCTCAACAGCGCCTGCCGAGGAAGTC
GTTCTGGGCCTGAGCAAGGA

Product: integral membrane protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MALRLNEVMQIYLPIAEVSVNAFLLLGLGGIVGILSGMFGVGGGFLMTPLLFFIGIPPAVAVATEANQIVASSFSGVLAH
LKRKTVDLKMGTVLLIGGLAGAAVGVVIFNYLKAQGQVDLLVKLCYVVFLGVIGGLMFIESLNAIRNTKKGKPPARKKHN
WIHGLPFKMRFRVSGLYISVIPPLIVGLCVGILAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHA
TTNFTVDIVLAVLLLIGGVIGAQVGTRIGVKLKAEQLRILLAIMVLAVCGKLALDLLLMPSELYSIGASAGH

Sequences:

>Translated_312_residues
MALRLNEVMQIYLPIAEVSVNAFLLLGLGGIVGILSGMFGVGGGFLMTPLLFFIGIPPAVAVATEANQIVASSFSGVLAH
LKRKTVDLKMGTVLLIGGLAGAAVGVVIFNYLKAQGQVDLLVKLCYVVFLGVIGGLMFIESLNAIRNTKKGKPPARKKHN
WIHGLPFKMRFRVSGLYISVIPPLIVGLCVGILAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHA
TTNFTVDIVLAVLLLIGGVIGAQVGTRIGVKLKAEQLRILLAIMVLAVCGKLALDLLLMPSELYSIGASAGH
>Mature_311_residues
ALRLNEVMQIYLPIAEVSVNAFLLLGLGGIVGILSGMFGVGGGFLMTPLLFFIGIPPAVAVATEANQIVASSFSGVLAHL
KRKTVDLKMGTVLLIGGLAGAAVGVVIFNYLKAQGQVDLLVKLCYVVFLGVIGGLMFIESLNAIRNTKKGKPPARKKHNW
IHGLPFKMRFRVSGLYISVIPPLIVGLCVGILAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHAT
TNFTVDIVLAVLLLIGGVIGAQVGTRIGVKLKAEQLRILLAIMVLAVCGKLALDLLLMPSELYSIGASAGH

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32792; Mature: 32661

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCC
>Mature Secondary Structure 
ALRLNEVMQIYLPIAEVSVNAFLLLGLGGIVGILSGMFGVGGGFLMTPLLFFIGIPPAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
AVATEANQIVASSFSGVLAHLKRKTVDLKMGTVLLIGGLAGAAVGVVIFNYLKAQGQVDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHEEHHHHHHHHHHHHHHHHHCCCCHHH
LVKLCYVVFLGVIGGLMFIESLNAIRNTKKGKPPARKKHNWIHGLPFKMRFRVSGLYISV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCEEEEEECCCHHHH
IPPLIVGLCVGILAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TTNFTVDIVLAVLLLIGGVIGAQVGTRIGVKLKAEQLRILLAIMVLAVCGKLALDLLLMP
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SELYSIGASAGH
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]