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The map label for this gene is 110678924

Identifier: 110678924

GI number: 110678924

Start: 1560780

End: 1561535

Strand: Direct

Name: 110678924

Synonym: RD1_1618

Alternate gene names: NA

Gene position: 1560780-1561535 (Clockwise)

Preceding gene: 110678922

Following gene: 110678926

Centisome position: 37.76

GC content: 57.94

Gene sequence:

>756_bases
ATGTTGACACTCGACCTGACCTTTTTCCTGATCGCAGGACCGGCTGTGATTTTCGCGGGCGTTTCAAAGGGGGGATTTGG
ATCAGGTGCAGCTTTTGCATCTGCAAGCATTTTGGCGCTGGTCGTGGAGCCGGGCGTTGCTCTGGGGGTGATGCTGCCGC
TTTTGATGCTGATTGATGTCAGCACACTGCGACCCTACTGGCGCAAGTGGGATACGCAGGCCGCGATATTATTGATTTTG
GGTGCGCTGCCGGGGGTCGCGCTTGGGGCGGCTTTGTACAAATTTACTGAACCTGACGTTTTCCGCGTGTTGATCGGCGT
TATTTCGGTCGGGTTTGTCATCTGGCAGATCGCAACCGCCAAGGGGGTCGTCAAAATGGCCAGCAGGATGCTGTCCCCTG
CGGCGGGTGTTTGTGCGGGTGCGGTTGCAGGATTTACCAGCTTTGTGAGCCATGCCGGCGGCCCCCCCGCAGCGATTTAC
CTGCTCTCCAAGAAACTCGGCAAAACCGAATATCAGGCCACCACGGTGCTGGTGTTCTGGGCCGTGAACATTGCGAAATT
CGTACCATACGCATTTCTGGGCATGTTCACGTTGCAGACAGCAACGGCCAATCTGGTGCTTGCGCCCTTCGCGTTTCTGG
GCGCCTGGCTGGGTGTCAAGGCACACGCGGTGGTGCCCGAGCGCGCATTTTTCGCGCTGACATATGTCTTGCTGACCGTC
ACGGGGAGCAAGCTGATCTGGGACGGGCTGACCTGA

Upstream 100 bases:

>100_bases
TGAACGCGGGTTGCGCAAGTTTACTCGACCGATTGCCCTGATGATGGGCGCAGGCGGATAGCATTGGACAAAGCCGGGCC
TATGGGTGTTAAAGGCAGCC

Downstream 100 bases:

>100_bases
ACGGCGTCCGGCCCTGAAATGATGGCGTTTTTAACCCGCCATCTGCCACGGATTCCGCGCGGCTTGACCGGTTACACGTC
CTCGCCTTTGACGGGCAGGG

Product: integral membrane protein, putative

Products: NA

Alternate protein names: Conserved Domain Protein; Transmembrane Protein; DUF81 Family Membrane Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLTLDLTFFLIAGPAVIFAGVSKGGFGSGAAFASASILALVVEPGVALGVMLPLLMLIDVSTLRPYWRKWDTQAAILLIL
GALPGVALGAALYKFTEPDVFRVLIGVISVGFVIWQIATAKGVVKMASRMLSPAAGVCAGAVAGFTSFVSHAGGPPAAIY
LLSKKLGKTEYQATTVLVFWAVNIAKFVPYAFLGMFTLQTATANLVLAPFAFLGAWLGVKAHAVVPERAFFALTYVLLTV
TGSKLIWDGLT

Sequences:

>Translated_251_residues
MLTLDLTFFLIAGPAVIFAGVSKGGFGSGAAFASASILALVVEPGVALGVMLPLLMLIDVSTLRPYWRKWDTQAAILLIL
GALPGVALGAALYKFTEPDVFRVLIGVISVGFVIWQIATAKGVVKMASRMLSPAAGVCAGAVAGFTSFVSHAGGPPAAIY
LLSKKLGKTEYQATTVLVFWAVNIAKFVPYAFLGMFTLQTATANLVLAPFAFLGAWLGVKAHAVVPERAFFALTYVLLTV
TGSKLIWDGLT
>Mature_251_residues
MLTLDLTFFLIAGPAVIFAGVSKGGFGSGAAFASASILALVVEPGVALGVMLPLLMLIDVSTLRPYWRKWDTQAAILLIL
GALPGVALGAALYKFTEPDVFRVLIGVISVGFVIWQIATAKGVVKMASRMLSPAAGVCAGAVAGFTSFVSHAGGPPAAIY
LLSKKLGKTEYQATTVLVFWAVNIAKFVPYAFLGMFTLQTATANLVLAPFAFLGAWLGVKAHAVVPERAFFALTYVLLTV
TGSKLIWDGLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26287; Mature: 26287

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLDLTFFLIAGPAVIFAGVSKGGFGSGAAFASASILALVVEPGVALGVMLPLLMLIDV
CEEEHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHH
STLRPYWRKWDTQAAILLILGALPGVALGAALYKFTEPDVFRVLIGVISVGFVIWQIATA
HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KGVVKMASRMLSPAAGVCAGAVAGFTSFVSHAGGPPAAIYLLSKKLGKTEYQATTVLVFW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
AVNIAKFVPYAFLGMFTLQTATANLVLAPFAFLGAWLGVKAHAVVPERAFFALTYVLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
TGSKLIWDGLT
CCCHHCCCCCC
>Mature Secondary Structure
MLTLDLTFFLIAGPAVIFAGVSKGGFGSGAAFASASILALVVEPGVALGVMLPLLMLIDV
CEEEHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHH
STLRPYWRKWDTQAAILLILGALPGVALGAALYKFTEPDVFRVLIGVISVGFVIWQIATA
HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KGVVKMASRMLSPAAGVCAGAVAGFTSFVSHAGGPPAAIYLLSKKLGKTEYQATTVLVFW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
AVNIAKFVPYAFLGMFTLQTATANLVLAPFAFLGAWLGVKAHAVVPERAFFALTYVLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
TGSKLIWDGLT
CCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA