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The map label for this gene is 110678889

Identifier: 110678889

GI number: 110678889

Start: 1505122

End: 1506108

Strand: Direct

Name: 110678889

Synonym: RD1_1583

Alternate gene names: NA

Gene position: 1505122-1506108 (Clockwise)

Preceding gene: 110678887

Following gene: 110678890

Centisome position: 36.42

GC content: 59.37

Gene sequence:

>987_bases
ATGAAAACGCCCGCAATTATTGTGGCAACAGCCTTGCTGAGCCAGGCTGCATTTGCCGATGGTCACGAAGACCGCACGGG
ATGGCCCGAAAGCTTTACGGTTGCGACCGCGTCTCAGGGCGGCACATATTTCGCATACGGATCGGGTTGGGCCAACCTTG
TCGCGGAAGAACTCGGCATCAGTGGCGGTGGCGAAGTCACCGGTGGTCCGGGTCAGAACATGGCGCTGGTGCACACGGGT
GATGCGCAATTCGGCATGACGACCATGGGGCCGGCCGCCGAAGCCATCGCGGGCGAAAGCCCGATCGCGCCGGGCCTGCA
AATGACCAACGCATGTGCGATGTTCCCGATGTATCAGACGCCTTTCTCGGTCACGACGCTTGCATCCTCCGGGATCACCG
CAATTTCCGAAATCCCTGAAGGTGCGCGCATCGGGTTTGGCCCCGCGGGTTCCACGTCTGATACGTACTTCCCACGCATG
ATGGACACGCTCGGCGTCAATTACGAGCGCCGCAACGGATCATGGAGCGATCTGGGCGGTCAGCTTCAGGACGGTCTGCT
GGACGTGATCGCCTTTGCGGCGGGTGTGCCGGTTCCTGCGGTCAGCCAGCTTGAAGTGCAAACGGATGTGAACATCATCG
AGTTCACCGCCGAAGAGCAGGCGACCATCATGGAGGCATTCCCGGTGGCGGCCTATGCGATTGCCGAAAGCACCTATTCA
ACGCTTGAAGCCGATGCGCGCTCGGTTTCGATGTGGAACTTTGCCATTGCGAATTGCGATCTGCCCAACAGCTTTGTCAA
AGCGGTGGTCGATATCATTATGTCGGACAATGAGCGTATGATGAACATCCACAAGGCCGCCCGCACGACTGTGCCGGAAA
ACTGGGACAAGAACGCCGGTGTGATCGCCTGGCATCCAGGTGCCGCAGAGTGGTTCATTGAGAACGCCGGGGCCGATATC
CCCGCCGATCAGATCCACAGCAAGTAA

Upstream 100 bases:

>100_bases
ATGACGCCTAATTACGAAAGCACACTCGACGCGGGTCGTCGGGAGATAACAAGCGCGGTGCATCTGAAAGCACCCGAAAT
GAACACGTGGAGGAAGACTT

Downstream 100 bases:

>100_bases
ATCTCAAAGCCCCTGAGCTGCGCCGCTGGCGTGGCTCAGGTTGATACGCATTTCCTGCACGCGCCAATATCCGGTGTTGT
GCAGACGACGCTCACAGCGA

Product: TRAP-type transporter, putative

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; Immunogenic Protein; TRAP-Type Transporter Periplasmic Component; TRAP Transporter Solute Receptor; Trap Transporter Solute Receptor Taxi Family; TAXI Family TRAP Transporter Solute Receptor; Perriplasmic Solute Receptor; TRAP-Type Transport System Periplasmic Component; TRAP-Type Transporter; TRAP Type Immunogenic Protein; TRAP-Type Transport System

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKTPAIIVATALLSQAAFADGHEDRTGWPESFTVATASQGGTYFAYGSGWANLVAEELGISGGGEVTGGPGQNMALVHTG
DAQFGMTTMGPAAEAIAGESPIAPGLQMTNACAMFPMYQTPFSVTTLASSGITAISEIPEGARIGFGPAGSTSDTYFPRM
MDTLGVNYERRNGSWSDLGGQLQDGLLDVIAFAAGVPVPAVSQLEVQTDVNIIEFTAEEQATIMEAFPVAAYAIAESTYS
TLEADARSVSMWNFAIANCDLPNSFVKAVVDIIMSDNERMMNIHKAARTTVPENWDKNAGVIAWHPGAAEWFIENAGADI
PADQIHSK

Sequences:

>Translated_328_residues
MKTPAIIVATALLSQAAFADGHEDRTGWPESFTVATASQGGTYFAYGSGWANLVAEELGISGGGEVTGGPGQNMALVHTG
DAQFGMTTMGPAAEAIAGESPIAPGLQMTNACAMFPMYQTPFSVTTLASSGITAISEIPEGARIGFGPAGSTSDTYFPRM
MDTLGVNYERRNGSWSDLGGQLQDGLLDVIAFAAGVPVPAVSQLEVQTDVNIIEFTAEEQATIMEAFPVAAYAIAESTYS
TLEADARSVSMWNFAIANCDLPNSFVKAVVDIIMSDNERMMNIHKAARTTVPENWDKNAGVIAWHPGAAEWFIENAGADI
PADQIHSK
>Mature_328_residues
MKTPAIIVATALLSQAAFADGHEDRTGWPESFTVATASQGGTYFAYGSGWANLVAEELGISGGGEVTGGPGQNMALVHTG
DAQFGMTTMGPAAEAIAGESPIAPGLQMTNACAMFPMYQTPFSVTTLASSGITAISEIPEGARIGFGPAGSTSDTYFPRM
MDTLGVNYERRNGSWSDLGGQLQDGLLDVIAFAAGVPVPAVSQLEVQTDVNIIEFTAEEQATIMEAFPVAAYAIAESTYS
TLEADARSVSMWNFAIANCDLPNSFVKAVVDIIMSDNERMMNIHKAARTTVPENWDKNAGVIAWHPGAAEWFIENAGADI
PADQIHSK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34501; Mature: 34501

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPAIIVATALLSQAAFADGHEDRTGWPESFTVATASQGGTYFAYGSGWANLVAEELGI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHCC
SGGGEVTGGPGQNMALVHTGDAQFGMTTMGPAAEAIAGESPIAPGLQMTNACAMFPMYQT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCHHHCCCCCCC
PFSVTTLASSGITAISEIPEGARIGFGPAGSTSDTYFPRMMDTLGVNYERRNGSWSDLGG
CCEEEEHHCCCCHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHCCC
QLQDGLLDVIAFAAGVPVPAVSQLEVQTDVNIIEFTAEEQATIMEAFPVAAYAIAESTYS
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
TLEADARSVSMWNFAIANCDLPNSFVKAVVDIIMSDNERMMNIHKAARTTVPENWDKNAG
HHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC
VIAWHPGAAEWFIENAGADIPADQIHSK
EEEECCCCCEEEEECCCCCCCHHHHCCC
>Mature Secondary Structure
MKTPAIIVATALLSQAAFADGHEDRTGWPESFTVATASQGGTYFAYGSGWANLVAEELGI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHCC
SGGGEVTGGPGQNMALVHTGDAQFGMTTMGPAAEAIAGESPIAPGLQMTNACAMFPMYQT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCHHHCCCCCCC
PFSVTTLASSGITAISEIPEGARIGFGPAGSTSDTYFPRMMDTLGVNYERRNGSWSDLGG
CCEEEEHHCCCCHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHCCC
QLQDGLLDVIAFAAGVPVPAVSQLEVQTDVNIIEFTAEEQATIMEAFPVAAYAIAESTYS
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
TLEADARSVSMWNFAIANCDLPNSFVKAVVDIIMSDNERMMNIHKAARTTVPENWDKNAG
HHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC
VIAWHPGAAEWFIENAGADIPADQIHSK
EEEECCCCCEEEEECCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA