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The map label for this gene is 110678890

Identifier: 110678890

GI number: 110678890

Start: 1506223

End: 1508451

Strand: Direct

Name: 110678890

Synonym: RD1_1584

Alternate gene names: NA

Gene position: 1506223-1508451 (Clockwise)

Preceding gene: 110678889

Following gene: 110678891

Centisome position: 36.44

GC content: 59.49

Gene sequence:

>2229_bases
ATGGTCAGCACCCCCCAGCCAGACAGTGCGGTCGAAAGCCCGATCAACACGCAAGGGGTCGATGACGAACCGCTTGGCAG
CAACCAGCGCGTGTTTGAGGGGCGCACCAAATTCCTGATCGCTGCTTTTGCAGGGATCTATGCGCTGTTTCACATGGCGG
TTCTGAACGGGTGGTCGATTGGTGGCTGGACCGGCATTTACATCCCCTACCTGCCGGTTTTCCCGATGGAGACGTGGAAT
TTCCGGATCGTTCATATCGCCGGGGCGCTGACGCTGGGCTTTCTGCTCTACTCGGCGCGTGGCTTTTCGGATGAGCCGCA
GCGTCGCAACCATCCGCTTGATATCGTTGCATATGTTGCGCTGCTGCCGGCGCTTTACGCCTGTGTCACCGCGCTTGGTT
TCGCGCGTGACATTGCGGGTGGCACGATGTGGAACGGCATTGATCCTGCGATCAGAAATGCAGAGATCTGGCATTATGGT
ATCCCCCTGATCGCTGCGACATCCATCGGCGTTCTGGTCGGTTGGATGCGCGCGCCGGAACGGGGCAGGCTGTCCCCCGC
CGACCTCGTGCTGATCATCTGCGCGGGCGGTGTTGCGATCTACCTGATCACGATTTTTGGCACCTTGATGCGCAATGCAA
CGGGCACGCCGTTTGCCCCGATCGGCATGAGCCTCGCAGCCGTGGCCGGAACCATTCTGATCATGGAGATGACGCGCCGG
GTTGCGGGCCTTGCGCTGATCGTGATCGCGGGGGTTTTCCTCGTCTATGTCTTTGTCGGTGAACGCCTGCCGGGATTCCT
CAATGCGCCTGACATCACATGGCAGAGGTTCTTCAGCCAAGTCTATACGGATGCGGGAATTCTGGGGCCGACCACGGCGG
TATCCTCGACCTATATCATTCTGTTCATCATCTTTGCCGCGTTCCTGCAGGCGTCCAAAGTGGGTGAATACTTTGTGAAC
TTCGCATTTGCGGCTGCGGGGCGCGCGCGCGGTGGTCCTGCGAAAGTGTCCATCTTTGCCAGCGGTCTGATGGGCATGAT
CAACGGCACATCCGCCGGGAACGTGGTTGCAACGGGGTCCCTGACAATCCCCCTGATGAAGAAGGTCGGCTACAAACCGA
CCACGGCGGGTGCGGTTGAGGCTGCGGCCTCCACGGGTGGTCAGATCATGCCGCCGATCATGGGTGCAGGTGCCTTCATC
ATGGCCGAGATCACAGGCATCCCCTACACCGACATCGCCATCGCCGCGATCATTCCGGCGGTCCTTTACTTTGTGTCCGT
CTATTTCATGGTGGATTTCGAGGCGGCGAAACTGGGCATGCGTGGCATGCGCGAGGATGAACTGCCCAAATTCCGCGATA
TGGCGCGCCGGGTCTTTCTGTTCCTGCCGATTATCATCCTGATCGCTGCTCTCTTCATGGGATACTCGGTCATTCGCGCA
GGCACACTCGCCACAGCCGCCGCCGCCGTGGTCAGCTGGTTCACGCCCTACCGGATGGGGATCAAATCGGTCTCCAAGGC
CTTTGAACTCGCGGGCGTCATGTCCATCCAGATCATCGCGGTCTGTGCCTGTGCGGGTATCATCGTCGGGGTCATATCGC
TGACGGGCGTCGGGGCGCGGTTCTCGTCGGTTCTGCTGAGCATTGCAGACACCAACCAACTGCTGGCGCTGTTCTTTGCA
ATGTGTATTTCGATCCTGCTGGGCATGGGGATGCCGACGACTGCGGCCTATGCTGTTGCCGCCAGCGTCGTTGCACCGGG
ACTTGTGCAGCTTGGAATTCCGGCCCTGACGGCGCATTTCTTTGTCTTCTACTTTGCTGTGGTTTCGGCCATCACGCCGC
CTGTGGCGCTGGCCAGCTATGCGGCGGCAGGTATCTCGGGCGCAAACCCGATGGCCACCTCTGTCGCCTCTTTCAAGATC
GGAATCTCCGCTTTCATCGTGCCGTTCATGTTCTTTTACAACTCGGCCCTGTTGATGGATGGCACATGGTTCGAAGTCCT
CAGGGCAGGCGTTACAGCCATCCTCGGCGTTTACCTTTTGTCTTCGGGTGTACAGGGGTGGTGGGCTGCACGTCGCGCGA
ATATCGTGATACGCGGGGCGTTGATCGTCGTCGCTCTGTTCATGATTGAAGGCGGTCTGGTCTCTGACCTGATCGGCATC
ACGGGGGCGGTCGCATTGTTCTTCCTGTCCCGTTTCATCGGCCAGGACGTCGCCAAGACACAGGCGTAA

Upstream 100 bases:

>100_bases
GAGCTGCGCCGCTGGCGTGGCTCAGGTTGATACGCATTTCCTGCACGCGCCAATATCCGGTGTTGTGCAGACGACGCTCA
CAGCGAAATGGAGCTCAGCC

Downstream 100 bases:

>100_bases
AACAGAAACGGCATGATCCGGGGCAAAGGGTTTTCGCCCAAAAGCGCGACACGGCCGTCAACCCGCGCCTTCGATTCTGA
TCGCTGCGGCAGGAATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; Inner Membrane Protein; TRAP-Type Transporter Permease Component; C4-Dicarboxylate Anaerobic Carrier; Permease; TRAP-Type Transport System Permease; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 742; Mature: 742

Protein sequence:

>742_residues
MVSTPQPDSAVESPINTQGVDDEPLGSNQRVFEGRTKFLIAAFAGIYALFHMAVLNGWSIGGWTGIYIPYLPVFPMETWN
FRIVHIAGALTLGFLLYSARGFSDEPQRRNHPLDIVAYVALLPALYACVTALGFARDIAGGTMWNGIDPAIRNAEIWHYG
IPLIAATSIGVLVGWMRAPERGRLSPADLVLIICAGGVAIYLITIFGTLMRNATGTPFAPIGMSLAAVAGTILIMEMTRR
VAGLALIVIAGVFLVYVFVGERLPGFLNAPDITWQRFFSQVYTDAGILGPTTAVSSTYIILFIIFAAFLQASKVGEYFVN
FAFAAAGRARGGPAKVSIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYKPTTAGAVEAAASTGGQIMPPIMGAGAFI
MAEITGIPYTDIAIAAIIPAVLYFVSVYFMVDFEAAKLGMRGMREDELPKFRDMARRVFLFLPIIILIAALFMGYSVIRA
GTLATAAAAVVSWFTPYRMGIKSVSKAFELAGVMSIQIIAVCACAGIIVGVISLTGVGARFSSVLLSIADTNQLLALFFA
MCISILLGMGMPTTAAYAVAASVVAPGLVQLGIPALTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMATSVASFKI
GISAFIVPFMFFYNSALLMDGTWFEVLRAGVTAILGVYLLSSGVQGWWAARRANIVIRGALIVVALFMIEGGLVSDLIGI
TGAVALFFLSRFIGQDVAKTQA

Sequences:

>Translated_742_residues
MVSTPQPDSAVESPINTQGVDDEPLGSNQRVFEGRTKFLIAAFAGIYALFHMAVLNGWSIGGWTGIYIPYLPVFPMETWN
FRIVHIAGALTLGFLLYSARGFSDEPQRRNHPLDIVAYVALLPALYACVTALGFARDIAGGTMWNGIDPAIRNAEIWHYG
IPLIAATSIGVLVGWMRAPERGRLSPADLVLIICAGGVAIYLITIFGTLMRNATGTPFAPIGMSLAAVAGTILIMEMTRR
VAGLALIVIAGVFLVYVFVGERLPGFLNAPDITWQRFFSQVYTDAGILGPTTAVSSTYIILFIIFAAFLQASKVGEYFVN
FAFAAAGRARGGPAKVSIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYKPTTAGAVEAAASTGGQIMPPIMGAGAFI
MAEITGIPYTDIAIAAIIPAVLYFVSVYFMVDFEAAKLGMRGMREDELPKFRDMARRVFLFLPIIILIAALFMGYSVIRA
GTLATAAAAVVSWFTPYRMGIKSVSKAFELAGVMSIQIIAVCACAGIIVGVISLTGVGARFSSVLLSIADTNQLLALFFA
MCISILLGMGMPTTAAYAVAASVVAPGLVQLGIPALTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMATSVASFKI
GISAFIVPFMFFYNSALLMDGTWFEVLRAGVTAILGVYLLSSGVQGWWAARRANIVIRGALIVVALFMIEGGLVSDLIGI
TGAVALFFLSRFIGQDVAKTQA
>Mature_742_residues
MVSTPQPDSAVESPINTQGVDDEPLGSNQRVFEGRTKFLIAAFAGIYALFHMAVLNGWSIGGWTGIYIPYLPVFPMETWN
FRIVHIAGALTLGFLLYSARGFSDEPQRRNHPLDIVAYVALLPALYACVTALGFARDIAGGTMWNGIDPAIRNAEIWHYG
IPLIAATSIGVLVGWMRAPERGRLSPADLVLIICAGGVAIYLITIFGTLMRNATGTPFAPIGMSLAAVAGTILIMEMTRR
VAGLALIVIAGVFLVYVFVGERLPGFLNAPDITWQRFFSQVYTDAGILGPTTAVSSTYIILFIIFAAFLQASKVGEYFVN
FAFAAAGRARGGPAKVSIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYKPTTAGAVEAAASTGGQIMPPIMGAGAFI
MAEITGIPYTDIAIAAIIPAVLYFVSVYFMVDFEAAKLGMRGMREDELPKFRDMARRVFLFLPIIILIAALFMGYSVIRA
GTLATAAAAVVSWFTPYRMGIKSVSKAFELAGVMSIQIIAVCACAGIIVGVISLTGVGARFSSVLLSIADTNQLLALFFA
MCISILLGMGMPTTAAYAVAASVVAPGLVQLGIPALTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMATSVASFKI
GISAFIVPFMFFYNSALLMDGTWFEVLRAGVTAILGVYLLSSGVQGWWAARRANIVIRGALIVVALFMIEGGLVSDLIGI
TGAVALFFLSRFIGQDVAKTQA

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78364; Mature: 78364

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTPQPDSAVESPINTQGVDDEPLGSNQRVFEGRTKFLIAAFAGIYALFHMAVLNGWSI
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
GGWTGIYIPYLPVFPMETWNFRIVHIAGALTLGFLLYSARGFSDEPQRRNHPLDIVAYVA
CCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHH
LLPALYACVTALGFARDIAGGTMWNGIDPAIRNAEIWHYGIPLIAATSIGVLVGWMRAPE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCC
RGRLSPADLVLIICAGGVAIYLITIFGTLMRNATGTPFAPIGMSLAAVAGTILIMEMTRR
CCCCCHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAGLALIVIAGVFLVYVFVGERLPGFLNAPDITWQRFFSQVYTDAGILGPTTAVSSTYII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LFIIFAAFLQASKVGEYFVNFAFAAAGRARGGPAKVSIFASGLMGMINGTSAGNVVATGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEECC
LTIPLMKKVGYKPTTAGAVEAAASTGGQIMPPIMGAGAFIMAEITGIPYTDIAIAAIIPA
CHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHH
VLYFVSVYFMVDFEAAKLGMRGMREDELPKFRDMARRVFLFLPIIILIAALFMGYSVIRA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLATAAAAVVSWFTPYRMGIKSVSKAFELAGVMSIQIIAVCACAGIIVGVISLTGVGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FSSVLLSIADTNQLLALFFAMCISILLGMGMPTTAAYAVAASVVAPGLVQLGIPALTAHF
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCHHHHHHHH
FVFYFAVVSAITPPVALASYAAAGISGANPMATSVASFKIGISAFIVPFMFFYNSALLMD
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC
GTWFEVLRAGVTAILGVYLLSSGVQGWWAARRANIVIRGALIVVALFMIEGGLVSDLIGI
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEHHHHHHHHHHHHCCCHHHHHHHH
TGAVALFFLSRFIGQDVAKTQA
HHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MVSTPQPDSAVESPINTQGVDDEPLGSNQRVFEGRTKFLIAAFAGIYALFHMAVLNGWSI
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
GGWTGIYIPYLPVFPMETWNFRIVHIAGALTLGFLLYSARGFSDEPQRRNHPLDIVAYVA
CCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHH
LLPALYACVTALGFARDIAGGTMWNGIDPAIRNAEIWHYGIPLIAATSIGVLVGWMRAPE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCC
RGRLSPADLVLIICAGGVAIYLITIFGTLMRNATGTPFAPIGMSLAAVAGTILIMEMTRR
CCCCCHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAGLALIVIAGVFLVYVFVGERLPGFLNAPDITWQRFFSQVYTDAGILGPTTAVSSTYII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LFIIFAAFLQASKVGEYFVNFAFAAAGRARGGPAKVSIFASGLMGMINGTSAGNVVATGS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEECC
LTIPLMKKVGYKPTTAGAVEAAASTGGQIMPPIMGAGAFIMAEITGIPYTDIAIAAIIPA
CHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHH
VLYFVSVYFMVDFEAAKLGMRGMREDELPKFRDMARRVFLFLPIIILIAALFMGYSVIRA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLATAAAAVVSWFTPYRMGIKSVSKAFELAGVMSIQIIAVCACAGIIVGVISLTGVGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FSSVLLSIADTNQLLALFFAMCISILLGMGMPTTAAYAVAASVVAPGLVQLGIPALTAHF
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCHHHHHHHH
FVFYFAVVSAITPPVALASYAAAGISGANPMATSVASFKIGISAFIVPFMFFYNSALLMD
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC
GTWFEVLRAGVTAILGVYLLSSGVQGWWAARRANIVIRGALIVVALFMIEGGLVSDLIGI
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEHHHHHHHHHHHHCCCHHHHHHHH
TGAVALFFLSRFIGQDVAKTQA
HHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA