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The map label for this gene is norB [H]

Identifier: 110678868

GI number: 110678868

Start: 1483583

End: 1484953

Strand: Reverse

Name: norB [H]

Synonym: RD1_1561

Alternate gene names: 110678868

Gene position: 1484953-1483583 (Counterclockwise)

Preceding gene: 110678869

Following gene: 110678867

Centisome position: 35.93

GC content: 57.84

Gene sequence:

>1371_bases
ATGAAATACCAATCTCAATCCATTGCCCTTGTCTACTTTGCCGTAGCGCTCGGGCTGTTTGCCATTCAGGTTTCGGGGGG
TCTGCTGCTGGGCTGGATCTATGTCAGCCCCAACTTCCTGTCCGAAATCCTGCCCTTCAACATCGTGCGCATGCTGCACA
CGAACTCCCTGATCGTCTGGCTGCTGCTGGGCTTCATGGGGGCGGCGTACTTTGTCATCCCCGAGGAATCAGAGCGTGAA
ATCCACTCGCCGCTGCTGGCCTACCTCCAGCTGGCGATCATGGTGCTGGGCACGCTCGGCGTTGTTGTGACCTATCTGTT
CAACCTCTTTGAGGGCAACTGGCTCTTGGGCAAAGAGGGGCGCGAGTTCCTGGAACAACCCGTCTGGGTCAAGATGGGCA
TTGTCGTGGCCGCGTTGATCTTCATGTACAACATCTCCATGACCGTGCTGCAAGGCCGCAAGACTGCGATCACCAACGTG
CTGCTGCTGGGTCTGTGGGGGCTGACGCTCCTGTTTCTCTTTGCTTTCTACAACCCGTCAAACCTCGCGCTGGACAAGAT
GTACTGGTGGTACGTCGTTCACCTGTGGGTCGAAGGCACATGGGAGTTGGTCATGGCGTCGGTACTGGCATTCCTGATGC
TCAAACTGACAGGTGTTGACCGTGAGATCATCGAAAAATGGCTCTATCTGATCGTTGCTACCGCGCTGTTCTCGGGCATC
CTCGGCACCGGTCACCACTATTTCTGGATCGGGACACCGGGCTACTGGCAGTGGATCGGGTCGATCTTCTCCGCCCTCGA
AGTCGTTCCCTTCTTTGGCATGATGGCCTTTGCCTTTGTCATGGTTTGGAAAGGCCGCAAGGATCACCCCAACAAGGCCG
CTCTGCTGTGGTCGCTGGGCTGTGCGACGCTGGCGTTCTTCGGGGCCGGTGTCTGGGGCTTTCTGCACACGCTGCACGGG
ATCAACTACTACACCCATGGCACGCAGATCACCGCCGCGCATGGGCACCTTGCCTTCTTTGGGGCCTATGTATCGCTGAA
CCTCGCGATCTTCAGCTATGCCTTCCCGATCCTGCGCAAGCGTGATCCCTACAATCAGGTGCTGAACATGGCGTCCTTCT
GGCTGATGGCCGGTGGTATGACCTTCATGACCTTCGTGCTGACCTTCGCAGGCACGGTCCAAACCCATGCACAGCGCGTG
CAGGGCGACTATTTCATGGATGTTCAGGATGCGATCACCATCTTCTACTGGATGCGGTTCGGCTCCGGCATCGCCGTGGT
CCTTGGGGCGCTGTTGTTCATCTACGCCGTGGCAGTCCCCCGCAAGGAGATCATCTCGCCCAGCGACAAACAACCGGTGG
CTGCGGAATGA

Upstream 100 bases:

>100_bases
GAACGACGAAGAGTATCGCGCGTTGAGCGACTTCCTGCTGTGGACCAACACGATCCGCAATCAGGACTGGCCACCGAACG
ACGCTGGATAAGGAAACACC

Downstream 100 bases:

>100_bases
ACATGCAATCTCCCACACTTGACAAGGGGGCGGCTGACGCCCCCTTTTACATGCCTCAAGGTTCCGAATGTGAGCTGTTC
GAGGCGGCCTATGAAACCAA

Product: nitric-oxide reductase subunit B

Products: NA

Alternate protein names: NOR large subunit; Nitric oxide reductase cytochrome b subunit [H]

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIYVSPNFLSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEESERE
IHSPLLAYLQLAIMVLGTLGVVVTYLFNLFEGNWLLGKEGREFLEQPVWVKMGIVVAALIFMYNISMTVLQGRKTAITNV
LLLGLWGLTLLFLFAFYNPSNLALDKMYWWYVVHLWVEGTWELVMASVLAFLMLKLTGVDREIIEKWLYLIVATALFSGI
LGTGHHYFWIGTPGYWQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLGCATLAFFGAGVWGFLHTLHG
INYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRKRDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQTHAQRV
QGDYFMDVQDAITIFYWMRFGSGIAVVLGALLFIYAVAVPRKEIISPSDKQPVAAE

Sequences:

>Translated_456_residues
MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIYVSPNFLSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEESERE
IHSPLLAYLQLAIMVLGTLGVVVTYLFNLFEGNWLLGKEGREFLEQPVWVKMGIVVAALIFMYNISMTVLQGRKTAITNV
LLLGLWGLTLLFLFAFYNPSNLALDKMYWWYVVHLWVEGTWELVMASVLAFLMLKLTGVDREIIEKWLYLIVATALFSGI
LGTGHHYFWIGTPGYWQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLGCATLAFFGAGVWGFLHTLHG
INYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRKRDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQTHAQRV
QGDYFMDVQDAITIFYWMRFGSGIAVVLGALLFIYAVAVPRKEIISPSDKQPVAAE
>Mature_456_residues
MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIYVSPNFLSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEESERE
IHSPLLAYLQLAIMVLGTLGVVVTYLFNLFEGNWLLGKEGREFLEQPVWVKMGIVVAALIFMYNISMTVLQGRKTAITNV
LLLGLWGLTLLFLFAFYNPSNLALDKMYWWYVVHLWVEGTWELVMASVLAFLMLKLTGVDREIIEKWLYLIVATALFSGI
LGTGHHYFWIGTPGYWQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLGCATLAFFGAGVWGFLHTLHG
INYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRKRDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQTHAQRV
QGDYFMDVQDAITIFYWMRFGSGIAVVLGALLFIYAVAVPRKEIISPSDKQPVAAE

Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen red

COG id: COG3256

COG function: function code P; Nitric oxide reductase large subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.7.99.7 [H]

Molecular weight: Translated: 51369; Mature: 51369

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIYVSPNFLSEILPFNIVRMLHTNSLIVW
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHH
LLLGFMGAAYFVIPEESEREIHSPLLAYLQLAIMVLGTLGVVVTYLFNLFEGNWLLGKEG
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
REFLEQPVWVKMGIVVAALIFMYNISMTVLQGRKTAITNVLLLGLWGLTLLFLFAFYNPS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NLALDKMYWWYVVHLWVEGTWELVMASVLAFLMLKLTGVDREIIEKWLYLIVATALFSGI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGTGHHYFWIGTPGYWQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLG
HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
CATLAFFGAGVWGFLHTLHGINYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRK
HHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
RDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQTHAQRVQGDYFMDVQDAITIFYWMRF
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHH
GSGIAVVLGALLFIYAVAVPRKEIISPSDKQPVAAE
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKYQSQSIALVYFAVALGLFAIQVSGGLLLGWIYVSPNFLSEILPFNIVRMLHTNSLIVW
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHH
LLLGFMGAAYFVIPEESEREIHSPLLAYLQLAIMVLGTLGVVVTYLFNLFEGNWLLGKEG
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
REFLEQPVWVKMGIVVAALIFMYNISMTVLQGRKTAITNVLLLGLWGLTLLFLFAFYNPS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NLALDKMYWWYVVHLWVEGTWELVMASVLAFLMLKLTGVDREIIEKWLYLIVATALFSGI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGTGHHYFWIGTPGYWQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLG
HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
CATLAFFGAGVWGFLHTLHGINYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRK
HHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
RDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQTHAQRVQGDYFMDVQDAITIFYWMRF
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHH
GSGIAVVLGALLFIYAVAVPRKEIISPSDKQPVAAE
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7508388; 2542222; 9521721 [H]