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The map label for this gene is 110678838

Identifier: 110678838

GI number: 110678838

Start: 1448025

End: 1449989

Strand: Direct

Name: 110678838

Synonym: RD1_1526

Alternate gene names: NA

Gene position: 1448025-1449989 (Clockwise)

Preceding gene: 110678837

Following gene: 110678839

Centisome position: 35.03

GC content: 59.08

Gene sequence:

>1965_bases
GTGTACTCGCGTGCTGTTGAGACGATCGAAAGGCACCCAATGTCGGCACCTGGAATACTTGGGCTTCTCTTCTCCACAGG
ATCCCGCCGCAGCATCAAGGGGCGTTTGTACTGGCCCATCCGGCTTTACACCGCGCTGTTTTCTGTCTGGGTCATGTGGG
CGGCAACGCTGTCGCGGATTGATGCGCTGTCTCTGACGGTCATTTTCCTGTGCCTGATATATGTACCCGCGTTTCTGCTC
ATCGGTGCCACAGACAGATCAGGGACAAAGGCCACGCTGCCGGACTGGATCCTGTCCTTGGCGGCGGCTGCCTGTGCCTG
CTATTTCATCATTAAAATTCCCGAAACAGCCTCCCGGATCAGCCTGTTTGACCAGCTGAGCACCGATCAGTTCATTATGG
CGTCCATCCTGATCCTGCTGACGCTTGAGATCACCCGGCGCACGGTTGGCCTGTTTCTGATGTGCATCGTTCTGACCTTC
ATCATCTACAATCTCTATGGGCATCTGATCAGCGGCCCGCTGGGGCACGGGTATATCTCGCTCAACCACTTTGTGGACAT
CAACATCTACACCACCGACGGATTGTTCGGCGTGCCGGTGCGCGTGGCGGCCACATATGCGTTCCTCTTCGTCATGTTCG
GCACGTTTCTGGAGCGAGCCAAGGGGGGCGCGTTTTTCTTTAACCTTGCGGCGACGATTTCGGGCCGGTCCGTGGGTGGC
CCTGCAAAGATCGCCGTGGTCTCATCGGCGTTGTTCGGCACCATGTCAGGCAGCCCCACATCCGACGTTGTGGCCACCGG
GTCGATCACGATCCCGATGATGAAAAGGCTGGGCTATGACCGTAGTCTGGCCGCCGGTGTTGAGGTCGCCTCGTCGACGG
GCGGTAGCCTCTTGCCGCCGGTCATGGGCTCTGCCGCCTTTATCATGGCCGAACTGATCGGCGTTGGATACGGAGAGATC
GTCATCGCCGCGCTTTTGCCTGCGTTGCTCTATTATGTTGGCATCTCCATTCAGGTGCACCTGCGCTCCGTCGCGCTGAA
CCTTGCGCCGCTGGATGCATCCGAGGTGCCGACCTTGGGCGAAACGATGCGTCAGGGCTGGCAGTTTCTCCTGCCGATCG
TGGGTTTGATCGTTTTGCTGGTGATGGGCTATTCACCGACAATGGTCGCAGTCTTCAGCGCGATTGCGGTCTGGGTTGTT
TCGCAATTCAACCCGCACACGCGCCTTGGGCTTAAGGCGACCATCGAAGCCCTGTCAGATACCGCCATTCGCATGATTGG
CGTCACCGGTGCCTGCGCCGCAGCGGGGCTGGTCATCGGTGGTATTACCATGACCGGGCTGGCGTCAAAGTTCTCCTTCA
TCGCTTTTGCGGCTGCGGGTGACAACATCATGATCATCCTGATGCTCAGCGCGGTTGTGACCATCGTTCTGGGTCTGGGC
ATGCCCACGCCCAGTGCCTATGTGCTCGCGGCTGTTCTGATCGGCCCCACTTTGGTGAACGACTTTGGCTTTCAGGAATT
GAACGCGCATCTGTTCCTGCTTTATTTTGCGGTGATGTCTGCGATGACGCCGCCGGTTGCGGTGGCGGCCTATGCGGCGG
CGGCCATATCCGGGGCCAATCCGCTCAAGATCGCGGTGGTTGCGATGCGCCTGTCCATCGTGGCCTTTGTCGTGCCCTTC
ATGTTCGTGGCGAACCCTTTGGTGCTGCAACCCTTTTCCAGCGTCGAGGCGATGCTGGTCAGCGCCGGTGTGGCCTTCGC
CTGCGTGCTGGTCGCCTGCGCGTCAGAGGCAAAGTGGCATGACCGTTGGTCCATGCCCACGCGTGTCGGAATGCTCCTCA
GCGCCGCGTTGCTGGCGGTTCCGGACACGAATGTCAAAATCATCGGCTGTGTCAGCGGGCTGATGCTGCTCACCTTCGCC
ATCAAGAAGTTCAAAGACCAATACGGACGCCTCGTTACCTCATGA

Upstream 100 bases:

>100_bases
CACGCTGATCGACTACCACCCTGCGGCGATGGCTGCGATCAAGGCTGCTGGCAGCTAAACCGCGCGATCATTCCGGCGTG
GGCACAAGGGGCGCGCCGGT

Downstream 100 bases:

>100_bases
AACAAACAACCCGTGATCTGGCCGTCTAAAGAAAGGCATGAATATGCTCCTCGACCTGCGAAAAATGAACCAACTCATCG
ACCTTTGGCTGGATGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Trap Family Transporter; TRAP-Type Transporter Permease Component; C4-Dicarboxylate Anaerobic Carrier; Permease; TRAP-Type Transport System Permease; TRAP-Type Transport System Permease Protein; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MYSRAVETIERHPMSAPGILGLLFSTGSRRSIKGRLYWPIRLYTALFSVWVMWAATLSRIDALSLTVIFLCLIYVPAFLL
IGATDRSGTKATLPDWILSLAAAACACYFIIKIPETASRISLFDQLSTDQFIMASILILLTLEITRRTVGLFLMCIVLTF
IIYNLYGHLISGPLGHGYISLNHFVDINIYTTDGLFGVPVRVAATYAFLFVMFGTFLERAKGGAFFFNLAATISGRSVGG
PAKIAVVSSALFGTMSGSPTSDVVATGSITIPMMKRLGYDRSLAAGVEVASSTGGSLLPPVMGSAAFIMAELIGVGYGEI
VIAALLPALLYYVGISIQVHLRSVALNLAPLDASEVPTLGETMRQGWQFLLPIVGLIVLLVMGYSPTMVAVFSAIAVWVV
SQFNPHTRLGLKATIEALSDTAIRMIGVTGACAAAGLVIGGITMTGLASKFSFIAFAAAGDNIMIILMLSAVVTIVLGLG
MPTPSAYVLAAVLIGPTLVNDFGFQELNAHLFLLYFAVMSAMTPPVAVAAYAAAAISGANPLKIAVVAMRLSIVAFVVPF
MFVANPLVLQPFSSVEAMLVSAGVAFACVLVACASEAKWHDRWSMPTRVGMLLSAALLAVPDTNVKIIGCVSGLMLLTFA
IKKFKDQYGRLVTS

Sequences:

>Translated_654_residues
MYSRAVETIERHPMSAPGILGLLFSTGSRRSIKGRLYWPIRLYTALFSVWVMWAATLSRIDALSLTVIFLCLIYVPAFLL
IGATDRSGTKATLPDWILSLAAAACACYFIIKIPETASRISLFDQLSTDQFIMASILILLTLEITRRTVGLFLMCIVLTF
IIYNLYGHLISGPLGHGYISLNHFVDINIYTTDGLFGVPVRVAATYAFLFVMFGTFLERAKGGAFFFNLAATISGRSVGG
PAKIAVVSSALFGTMSGSPTSDVVATGSITIPMMKRLGYDRSLAAGVEVASSTGGSLLPPVMGSAAFIMAELIGVGYGEI
VIAALLPALLYYVGISIQVHLRSVALNLAPLDASEVPTLGETMRQGWQFLLPIVGLIVLLVMGYSPTMVAVFSAIAVWVV
SQFNPHTRLGLKATIEALSDTAIRMIGVTGACAAAGLVIGGITMTGLASKFSFIAFAAAGDNIMIILMLSAVVTIVLGLG
MPTPSAYVLAAVLIGPTLVNDFGFQELNAHLFLLYFAVMSAMTPPVAVAAYAAAAISGANPLKIAVVAMRLSIVAFVVPF
MFVANPLVLQPFSSVEAMLVSAGVAFACVLVACASEAKWHDRWSMPTRVGMLLSAALLAVPDTNVKIIGCVSGLMLLTFA
IKKFKDQYGRLVTS
>Mature_654_residues
MYSRAVETIERHPMSAPGILGLLFSTGSRRSIKGRLYWPIRLYTALFSVWVMWAATLSRIDALSLTVIFLCLIYVPAFLL
IGATDRSGTKATLPDWILSLAAAACACYFIIKIPETASRISLFDQLSTDQFIMASILILLTLEITRRTVGLFLMCIVLTF
IIYNLYGHLISGPLGHGYISLNHFVDINIYTTDGLFGVPVRVAATYAFLFVMFGTFLERAKGGAFFFNLAATISGRSVGG
PAKIAVVSSALFGTMSGSPTSDVVATGSITIPMMKRLGYDRSLAAGVEVASSTGGSLLPPVMGSAAFIMAELIGVGYGEI
VIAALLPALLYYVGISIQVHLRSVALNLAPLDASEVPTLGETMRQGWQFLLPIVGLIVLLVMGYSPTMVAVFSAIAVWVV
SQFNPHTRLGLKATIEALSDTAIRMIGVTGACAAAGLVIGGITMTGLASKFSFIAFAAAGDNIMIILMLSAVVTIVLGLG
MPTPSAYVLAAVLIGPTLVNDFGFQELNAHLFLLYFAVMSAMTPPVAVAAYAAAAISGANPLKIAVVAMRLSIVAFVVPF
MFVANPLVLQPFSSVEAMLVSAGVAFACVLVACASEAKWHDRWSMPTRVGMLLSAALLAVPDTNVKIIGCVSGLMLLTFA
IKKFKDQYGRLVTS

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69377; Mature: 69377

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRAVETIERHPMSAPGILGLLFSTGSRRSIKGRLYWPIRLYTALFSVWVMWAATLSRI
CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
DALSLTVIFLCLIYVPAFLLIGATDRSGTKATLPDWILSLAAAACACYFIIKIPETASRI
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHH
SLFDQLSTDQFIMASILILLTLEITRRTVGLFLMCIVLTFIIYNLYGHLISGPLGHGYIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LNHFVDINIYTTDGLFGVPVRVAATYAFLFVMFGTFLERAKGGAFFFNLAATISGRSVGG
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
PAKIAVVSSALFGTMSGSPTSDVVATGSITIPMMKRLGYDRSLAAGVEVASSTGGSLLPP
CHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCH
VMGSAAFIMAELIGVGYGEIVIAALLPALLYYVGISIQVHLRSVALNLAPLDASEVPTLG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHEEECCCCCCCCCCHH
ETMRQGWQFLLPIVGLIVLLVMGYSPTMVAVFSAIAVWVVSQFNPHTRLGLKATIEALSD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TAIRMIGVTGACAAAGLVIGGITMTGLASKFSFIAFAAAGDNIMIILMLSAVVTIVLGLG
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHCC
MPTPSAYVLAAVLIGPTLVNDFGFQELNAHLFLLYFAVMSAMTPPVAVAAYAAAAISGAN
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PLKIAVVAMRLSIVAFVVPFMFVANPLVLQPFSSVEAMLVSAGVAFACVLVACASEAKWH
CHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRWSMPTRVGMLLSAALLAVPDTNVKIIGCVSGLMLLTFAIKKFKDQYGRLVTS
CCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MYSRAVETIERHPMSAPGILGLLFSTGSRRSIKGRLYWPIRLYTALFSVWVMWAATLSRI
CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
DALSLTVIFLCLIYVPAFLLIGATDRSGTKATLPDWILSLAAAACACYFIIKIPETASRI
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHH
SLFDQLSTDQFIMASILILLTLEITRRTVGLFLMCIVLTFIIYNLYGHLISGPLGHGYIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LNHFVDINIYTTDGLFGVPVRVAATYAFLFVMFGTFLERAKGGAFFFNLAATISGRSVGG
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
PAKIAVVSSALFGTMSGSPTSDVVATGSITIPMMKRLGYDRSLAAGVEVASSTGGSLLPP
CHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCH
VMGSAAFIMAELIGVGYGEIVIAALLPALLYYVGISIQVHLRSVALNLAPLDASEVPTLG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHEEECCCCCCCCCCHH
ETMRQGWQFLLPIVGLIVLLVMGYSPTMVAVFSAIAVWVVSQFNPHTRLGLKATIEALSD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TAIRMIGVTGACAAAGLVIGGITMTGLASKFSFIAFAAAGDNIMIILMLSAVVTIVLGLG
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHCC
MPTPSAYVLAAVLIGPTLVNDFGFQELNAHLFLLYFAVMSAMTPPVAVAAYAAAAISGAN
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PLKIAVVAMRLSIVAFVVPFMFVANPLVLQPFSSVEAMLVSAGVAFACVLVACASEAKWH
CHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRWSMPTRVGMLLSAALLAVPDTNVKIIGCVSGLMLLTFAIKKFKDQYGRLVTS
CCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA