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The map label for this gene is 110678801

Identifier: 110678801

GI number: 110678801

Start: 1413615

End: 1415087

Strand: Reverse

Name: 110678801

Synonym: RD1_1489

Alternate gene names: NA

Gene position: 1415087-1413615 (Counterclockwise)

Preceding gene: 110678806

Following gene: 110678800

Centisome position: 34.24

GC content: 55.53

Gene sequence:

>1473_bases
ATGAGCAATAAACCATCGACGCACGGCCACCTCAGCCGCCGTTCTGTATTGGCTGGCGTGACCGCCTCAACCGCGTTTTT
GAACCCGCTGCAGACGGCTCGGGCCTCTGAACCGCTATTGCACGATATTGTTGCAGAACATGTGCGTGCTTTGGCCGGTG
GCAAAAACCTGAAGTTGCGTCTTTTGCTGCCGCGTGGCGCGCGCGCGAATGTCGGGCCTGTGATCACGGCATTCCGCGAA
ATGACCGGGGTCGAAGTTCTTTTGCACGAAGCCGATTTTGACGAAATCAACACCGAACTTTATCTGGACGCTCTCACTGG
AACTGACACCTATGACGTCGCCTTGCCTGCAACCTTCGGGGTGCCTGATCTGGTCGCATCCGGCGCAATTCTCCCCATTT
CCCAATACGCGGACAGGTATGAGCCGGCTGGCTTCAGGGATGGCATTATATTCAGCGTGGGCGACACATTCGACGGGAAA
ATATACGGGTTTCAAGCGGATGGCGACGCTTACACCATGTTCTACCACAAGGGGATGCTGGAGGATTCACAGGAACAGGC
GCGATATTCAGACAGGTACGGACGGGCCCTGAAGATCCCTGACACGTGGGAAGAACTCGACCGCCAGATGGACTTCTTCA
ACCGGCCAGATGAGGGAAAGTGGGGCGGTCTGTTGTTCAGAACCCCCAATTACCTGGCCTGGGAGTGGTGGATCAGGTTC
CATGCCAAGGGTGTATGGCCTTTTTCCACTGAAATGACCCCGCAGGTGGCCTCTGACGAAGGCGTTGAAGCGCTGGAAGA
AATGATCAGGGCCACCGCGCATCTTGCGCCCGAAGCGTCTCGGTTGGGTTTGTTCGAAAACTGGGAGCGATACAGTCAGG
GCGATGTCTACTGCAACATTGGCTGGGGCGGCTCACAAAAACACCTGAACGCGACACAGTCGGACATACGCAACCAAATG
GTATACGGGCCGATACCGGGCGGCATCCTGCAAGGCAAACCGTTGGCCATGCCCTATTTCAACTGGGGATGGAACTACGT
TGTCGCCAGCAACAGCCGACAGCCGGAAGTGGCCTATTTGTTCTGTCTTTTCGCCTCAACGCCTGAAATGTCGACCTTGG
CTGTCCGCCAGAAAGACGGCTTTTTTGACCCCTTCCGCGCCGAACACTATGAAGACGCAGGAATTAAGGAAGCCTATACG
GCTGAATTTCTTTCCGTCCAGCGCGCCAGCCTCGAATCCGCCATTCCGGACTTGTACCTGCAGAATCAGGGGGAGTATTT
CCGTGTCTTAAACGAATGGTTGATGCGTGCACTGACAGGAGAGGTTAGCCCTAAAAACGCCCTTGAGCGCGTGTCAAACA
GATGGTGGTCGATCACGAACACCTCCGGGCAAAAGAACCAGAAGGCGCGTTGGGCACAATTGCGCGCCAAGTATCCAAAA
CAAATCGGACTCGCACTGAGAGACCTGAGTTGA

Upstream 100 bases:

>100_bases
CGACGCGCCCTGCACGACGGTAGCCTTTGAGAATTAATGGAGCCTTAATGATCTTCTATAATGCTCCGCTCAGTGCGCTC
CTAAGAGATCGGCAGTTGGA

Downstream 100 bases:

>100_bases
TGCAAACGCAGGCCCATTAATCCGGTTTTAAGGCGCTCAGAGGTATACTGACACCAGTCTGTTGCAAAGGTATTCCATGA
TCAATTCTTGTGAAGGTCGT

Product: trehalose/maltose binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSNKPSTHGHLSRRSVLAGVTASTAFLNPLQTARASEPLLHDIVAEHVRALAGGKNLKLRLLLPRGARANVGPVITAFRE
MTGVEVLLHEADFDEINTELYLDALTGTDTYDVALPATFGVPDLVASGAILPISQYADRYEPAGFRDGIIFSVGDTFDGK
IYGFQADGDAYTMFYHKGMLEDSQEQARYSDRYGRALKIPDTWEELDRQMDFFNRPDEGKWGGLLFRTPNYLAWEWWIRF
HAKGVWPFSTEMTPQVASDEGVEALEEMIRATAHLAPEASRLGLFENWERYSQGDVYCNIGWGGSQKHLNATQSDIRNQM
VYGPIPGGILQGKPLAMPYFNWGWNYVVASNSRQPEVAYLFCLFASTPEMSTLAVRQKDGFFDPFRAEHYEDAGIKEAYT
AEFLSVQRASLESAIPDLYLQNQGEYFRVLNEWLMRALTGEVSPKNALERVSNRWWSITNTSGQKNQKARWAQLRAKYPK
QIGLALRDLS

Sequences:

>Translated_490_residues
MSNKPSTHGHLSRRSVLAGVTASTAFLNPLQTARASEPLLHDIVAEHVRALAGGKNLKLRLLLPRGARANVGPVITAFRE
MTGVEVLLHEADFDEINTELYLDALTGTDTYDVALPATFGVPDLVASGAILPISQYADRYEPAGFRDGIIFSVGDTFDGK
IYGFQADGDAYTMFYHKGMLEDSQEQARYSDRYGRALKIPDTWEELDRQMDFFNRPDEGKWGGLLFRTPNYLAWEWWIRF
HAKGVWPFSTEMTPQVASDEGVEALEEMIRATAHLAPEASRLGLFENWERYSQGDVYCNIGWGGSQKHLNATQSDIRNQM
VYGPIPGGILQGKPLAMPYFNWGWNYVVASNSRQPEVAYLFCLFASTPEMSTLAVRQKDGFFDPFRAEHYEDAGIKEAYT
AEFLSVQRASLESAIPDLYLQNQGEYFRVLNEWLMRALTGEVSPKNALERVSNRWWSITNTSGQKNQKARWAQLRAKYPK
QIGLALRDLS
>Mature_489_residues
SNKPSTHGHLSRRSVLAGVTASTAFLNPLQTARASEPLLHDIVAEHVRALAGGKNLKLRLLLPRGARANVGPVITAFREM
TGVEVLLHEADFDEINTELYLDALTGTDTYDVALPATFGVPDLVASGAILPISQYADRYEPAGFRDGIIFSVGDTFDGKI
YGFQADGDAYTMFYHKGMLEDSQEQARYSDRYGRALKIPDTWEELDRQMDFFNRPDEGKWGGLLFRTPNYLAWEWWIRFH
AKGVWPFSTEMTPQVASDEGVEALEEMIRATAHLAPEASRLGLFENWERYSQGDVYCNIGWGGSQKHLNATQSDIRNQMV
YGPIPGGILQGKPLAMPYFNWGWNYVVASNSRQPEVAYLFCLFASTPEMSTLAVRQKDGFFDPFRAEHYEDAGIKEAYTA
EFLSVQRASLESAIPDLYLQNQGEYFRVLNEWLMRALTGEVSPKNALERVSNRWWSITNTSGQKNQKARWAQLRAKYPKQ
IGLALRDLS

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55225; Mature: 55094

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKPSTHGHLSRRSVLAGVTASTAFLNPLQTARASEPLLHDIVAEHVRALAGGKNLKLR
CCCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEE
LLLPRGARANVGPVITAFREMTGVEVLLHEADFDEINTELYLDALTGTDTYDVALPATFG
EEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCC
VPDLVASGAILPISQYADRYEPAGFRDGIIFSVGDTFDGKIYGFQADGDAYTMFYHKGML
CHHHHHCCCCEEHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCC
EDSQEQARYSDRYGRALKIPDTWEELDRQMDFFNRPDEGKWGGLLFRTPNYLAWEWWIRF
CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEE
HAKGVWPFSTEMTPQVASDEGVEALEEMIRATAHLAPEASRLGLFENWERYSQGDVYCNI
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCEEEEE
GWGGSQKHLNATQSDIRNQMVYGPIPGGILQGKPLAMPYFNWGWNYVVASNSRQPEVAYL
CCCCCCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCEEEE
FCLFASTPEMSTLAVRQKDGFFDPFRAEHYEDAGIKEAYTAEFLSVQRASLESAIPDLYL
EEEECCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
QNQGEYFRVLNEWLMRALTGEVSPKNALERVSNRWWSITNTSGQKNQKARWAQLRAKYPK
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCH
QIGLALRDLS
HHCCHHHCCC
>Mature Secondary Structure 
SNKPSTHGHLSRRSVLAGVTASTAFLNPLQTARASEPLLHDIVAEHVRALAGGKNLKLR
CCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEE
LLLPRGARANVGPVITAFREMTGVEVLLHEADFDEINTELYLDALTGTDTYDVALPATFG
EEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCC
VPDLVASGAILPISQYADRYEPAGFRDGIIFSVGDTFDGKIYGFQADGDAYTMFYHKGML
CHHHHHCCCCEEHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCC
EDSQEQARYSDRYGRALKIPDTWEELDRQMDFFNRPDEGKWGGLLFRTPNYLAWEWWIRF
CCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEE
HAKGVWPFSTEMTPQVASDEGVEALEEMIRATAHLAPEASRLGLFENWERYSQGDVYCNI
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCEEEEE
GWGGSQKHLNATQSDIRNQMVYGPIPGGILQGKPLAMPYFNWGWNYVVASNSRQPEVAYL
CCCCCCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCEEEE
FCLFASTPEMSTLAVRQKDGFFDPFRAEHYEDAGIKEAYTAEFLSVQRASLESAIPDLYL
EEEECCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
QNQGEYFRVLNEWLMRALTGEVSPKNALERVSNRWWSITNTSGQKNQKARWAQLRAKYPK
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCH
QIGLALRDLS
HHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA