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The map label for this gene is fmdA [H]

Identifier: 110678806

GI number: 110678806

Start: 1419258

End: 1420196

Strand: Reverse

Name: fmdA [H]

Synonym: RD1_1494

Alternate gene names: 110678806

Gene position: 1420196-1419258 (Counterclockwise)

Preceding gene: 110678807

Following gene: 110678801

Centisome position: 34.36

GC content: 60.92

Gene sequence:

>939_bases
ATGAGCTGCAATCACACGATCCACAAGCACCACCATCACCTTGGCTGGGACAATGCGATCGACCCCGTGCTCAGCGTGGC
CCCCGGAGAGACCATCGCGGTTGAGACGATAGATGCCTCCGGCGGGCAATTGCATGCGCAGGCGACCCTGGATGATCTGA
AGGCGCTGGATTTTGACAAGGTCAATCCGGTAACCGGCCCGATTTACGTGGAGGGGGCCGAACCGGGCGATACCGTCGCG
ATCACTTTTCAGGCCTTTCATGCCTCGGGCTGGGGCTGGACGGCGAATATTCCGGGCTTCGGGCTGCTGGCCGATGACTT
TCCCGATCCGGCCCTGCATGTCTGGTCCTACGACACCGGGCTTGCCAGACCCGCCGTATTCGCGCCCTTCGGTCAGGTTG
CGTTGAAACCCTTCGTCGGGACGATCGGGCTGGCGCTGGCCGAAGCAGGGCAGCACAGCGTCGTACCGCCGCGCCGCGTG
GGCGGCAATCTGGACATCCGCGACAATTGTTTGGGCACGACGCTCTACCTGCCGGTCGAGGTAGCGGGTGGTTTGCTGTC
ACTCGGTGACACCCATGCGGCACAGGGCGACGGCGAGATCTGCGGCACCGCCATCGAAAGCCCGATGGATGTTGAGATCA
AGGTCGATCTGATAAAAGGCACGCAATCCCCCTTCCCACGGCTCGAAACCAGCGGCCCCGTCACCAATCATATTGACCAG
CAAGGATACCGGATCACGACGGGCATCGGTCCTGACCTTATGCAGTCATCGCGTGATGCGGTCCGACAGATGATTGATTG
GATCTGCGCGACCTGCGGCATTGCACCCGTTGAGGCTTACATGCTGTGCAGCGTTGCGGGCGACTTGCGGATATCGGAAA
TCGTGGACATGCCCAATTGGGTGGTAAGCTTCTACTTCCCGAAATCTGCCTTGGGGTAG

Upstream 100 bases:

>100_bases
GCATACCGGCGCACTGTCCTTTTGCCATGGACGCGGTAATCTGGTCACGATCCATAACGCACCCACAACGATCAGCATGT
CACCGAAGCGGAGGCCAAAC

Downstream 100 bases:

>100_bases
TGGCGATAGCTGCTACGCACCAGATGGGTTGGGGTATGGCGCCGACTGCGCGCCATTACGCCGTGGGAACGTTTTGGCCG
CGACGGCGATAAACGCCCCG

Product: formamidase, putative

Products: NA

Alternate protein names: Formamide amidohydrolase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSCNHTIHKHHHHLGWDNAIDPVLSVAPGETIAVETIDASGGQLHAQATLDDLKALDFDKVNPVTGPIYVEGAEPGDTVA
ITFQAFHASGWGWTANIPGFGLLADDFPDPALHVWSYDTGLARPAVFAPFGQVALKPFVGTIGLALAEAGQHSVVPPRRV
GGNLDIRDNCLGTTLYLPVEVAGGLLSLGDTHAAQGDGEICGTAIESPMDVEIKVDLIKGTQSPFPRLETSGPVTNHIDQ
QGYRITTGIGPDLMQSSRDAVRQMIDWICATCGIAPVEAYMLCSVAGDLRISEIVDMPNWVVSFYFPKSALG

Sequences:

>Translated_312_residues
MSCNHTIHKHHHHLGWDNAIDPVLSVAPGETIAVETIDASGGQLHAQATLDDLKALDFDKVNPVTGPIYVEGAEPGDTVA
ITFQAFHASGWGWTANIPGFGLLADDFPDPALHVWSYDTGLARPAVFAPFGQVALKPFVGTIGLALAEAGQHSVVPPRRV
GGNLDIRDNCLGTTLYLPVEVAGGLLSLGDTHAAQGDGEICGTAIESPMDVEIKVDLIKGTQSPFPRLETSGPVTNHIDQ
QGYRITTGIGPDLMQSSRDAVRQMIDWICATCGIAPVEAYMLCSVAGDLRISEIVDMPNWVVSFYFPKSALG
>Mature_311_residues
SCNHTIHKHHHHLGWDNAIDPVLSVAPGETIAVETIDASGGQLHAQATLDDLKALDFDKVNPVTGPIYVEGAEPGDTVAI
TFQAFHASGWGWTANIPGFGLLADDFPDPALHVWSYDTGLARPAVFAPFGQVALKPFVGTIGLALAEAGQHSVVPPRRVG
GNLDIRDNCLGTTLYLPVEVAGGLLSLGDTHAAQGDGEICGTAIESPMDVEIKVDLIKGTQSPFPRLETSGPVTNHIDQQ
GYRITTGIGPDLMQSSRDAVRQMIDWICATCGIAPVEAYMLCSVAGDLRISEIVDMPNWVVSFYFPKSALG

Specific function: Hydrolyzes formamide with the production of ammonia which can be used as a source of nitrogen for growth. Also acts, more slowly, on acetamide, propanamide and butanamide [H]

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetamidase/formamidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004304 [H]

Pfam domain/function: PF03069 FmdA_AmdA [H]

EC number: =3.5.1.49 [H]

Molecular weight: Translated: 33157; Mature: 33026

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCNHTIHKHHHHLGWDNAIDPVLSVAPGETIAVETIDASGGQLHAQATLDDLKALDFDK
CCCCCCHHHHHCCCCCCCHHCHHHCCCCCCEEEEEEEECCCCEEEEEECHHHHHHCCCCC
VNPVTGPIYVEGAEPGDTVAITFQAFHASGWGWTANIPGFGLLADDFPDPALHVWSYDTG
CCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEECCCCCCEEECCCCCCCCEEEEECCCC
LARPAVFAPFGQVALKPFVGTIGLALAEAGQHSVVPPRRVGGNLDIRDNCLGTTLYLPVE
CCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEHH
VAGGLLSLGDTHAAQGDGEICGTAIESPMDVEIKVDLIKGTQSPFPRLETSGPVTNHIDQ
HCCCEEECCCCCCCCCCCCEEHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
QGYRITTGIGPDLMQSSRDAVRQMIDWICATCGIAPVEAYMLCSVAGDLRISEIVDMPNW
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCE
VVSFYFPKSALG
EEEEECCHHCCC
>Mature Secondary Structure 
SCNHTIHKHHHHLGWDNAIDPVLSVAPGETIAVETIDASGGQLHAQATLDDLKALDFDK
CCCCCHHHHHCCCCCCCHHCHHHCCCCCCEEEEEEEECCCCEEEEEECHHHHHHCCCCC
VNPVTGPIYVEGAEPGDTVAITFQAFHASGWGWTANIPGFGLLADDFPDPALHVWSYDTG
CCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEECCCCCCEEECCCCCCCCEEEEECCCC
LARPAVFAPFGQVALKPFVGTIGLALAEAGQHSVVPPRRVGGNLDIRDNCLGTTLYLPVE
CCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEHH
VAGGLLSLGDTHAAQGDGEICGTAIESPMDVEIKVDLIKGTQSPFPRLETSGPVTNHIDQ
HCCCEEECCCCCCCCCCCCEEHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
QGYRITTGIGPDLMQSSRDAVRQMIDWICATCGIAPVEAYMLCSVAGDLRISEIVDMPNW
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCE
VVSFYFPKSALG
EEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8841393 [H]