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The map label for this gene is 110678784

Identifier: 110678784

GI number: 110678784

Start: 1395405

End: 1396580

Strand: Direct

Name: 110678784

Synonym: RD1_1471

Alternate gene names: NA

Gene position: 1395405-1396580 (Clockwise)

Preceding gene: 110678783

Following gene: 110678785

Centisome position: 33.76

GC content: 53.32

Gene sequence:

>1176_bases
ATGTCACAAGCCAACAAATACGAGCAGCAGATGCTGGATTTGATAAATGCAGACCGTGCAAAAGTCGGCCTCGATCCTTT
AGTATTCAACTCAGACCTCAATGAAGCCGGTGAAGACCACAGCGCATGGATGCTGGACAACGATCGCTTCAGTCACACTG
GTGCTGACGGATCCAATTCGCGCGAGCGTATCGAGGCTTCAGGCTATGAATTGGAAGGAAACTGGAAAACCGGCGAAAAC
ATAGCCTGGGTCAACGAAGCCGGTGACAATGGCTTGTCAGACGAAGTTGCCCGGCTGCACACCAACCTGATGAACAGCCC
CGAACATCGTGCAAACCTGTTGAACCCGGACTTCAAGGAAATCGGGATTGGTATCGAAGCCGGTGATTTTGTTGACGATG
GGCAGACGCTTGATGCGGTATTTGTCACCCAGAACTTTGGTACAACGAGCGCAAATACCGTCGTACTTCCCGATGCAGAT
ACGGACGCTCCGAGCGTGGTGGAACCAACACCTGCCGTGGTTGAAGACACAGCACCTGCAGAACCGGAAGTGACGGAATC
AGAAATCACTGCCGGAACCGGCTTTGATATCGAACAGTTCATGGCTTCGCGAGGTTTCAGTATAATTCAAGAGACAACCG
AAGACGTTGAAGAAACGAGCACGGGCAGCTCAAACACTCAAACCACCAGAAGCAGTGTCGAAGTCACGTCAGTTGCCAGC
GGCACGGATGGTCCGTCGGTGGATGTGCAAGGCGAAGGGAATTTCAGTGGTCAGGGATCAGCAACAGTTGATGATGTAAC
TGCAGAAGACGCGGGTTCGGCAGCCATCGCCATCCCCAGTACACAAGCTCCCATCGTTTCCAGAGTCCGCGATGAAGGGA
CGGGCGTGTGCGACGATGCAGGAGCTATGGAACTCGGCTCCGATGACTTCGTCTTTGAGTTTGGCCCCAACGTGCGAACG
GAATCCGGGTCAACGATCAGCAGCGCCAGTATCAGATCGCTCGCCAGTTCAGAGAATGGCCCAACCGTCGAGGTTCTGGC
CATGGAGGGAGACACTGATCTATTCGGAGCCGCCAGCAGCAATGGCGAAACGCAAAACATCGCGTTGAGTATGTCAGCTT
CTTCCGATTTGGCATCGTTCAGCGGCCCCGAATTCTTCGATGAGTACATATTCTAA

Upstream 100 bases:

>100_bases
ATTCGGGATACCAGTGATTCCCGCATACCGAGAACGCGGGTCATGTTTTGGATGCAGTCGACGGCCACATGATGCCACAA
ACCACTCAAAGGAGAATATC

Downstream 100 bases:

>100_bases
ACGCAGTGAGAGGGGTCTCTACGACCCCTCTGGTCACTATATCAATCGCCCCGGTTTTTCCGGAGACTATTGAGTTCGTA
TTTCAAGCCGCGATTTTATC

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; Transmembrane Protein; SCP-Like Extracellular Protein; RNA Polymerase ECF-Subfamily Sigma Factor; Allergen V5/Tpx-1 ; Lipoprotein; Membrane-Anchored Protein; SCP-Like Type I Secretion Target Protein; Fg-Gap; Bifunctional Protein Colicin V Production Protein; SCP-Like Extracellular Family Protein

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSQANKYEQQMLDLINADRAKVGLDPLVFNSDLNEAGEDHSAWMLDNDRFSHTGADGSNSRERIEASGYELEGNWKTGEN
IAWVNEAGDNGLSDEVARLHTNLMNSPEHRANLLNPDFKEIGIGIEAGDFVDDGQTLDAVFVTQNFGTTSANTVVLPDAD
TDAPSVVEPTPAVVEDTAPAEPEVTESEITAGTGFDIEQFMASRGFSIIQETTEDVEETSTGSSNTQTTRSSVEVTSVAS
GTDGPSVDVQGEGNFSGQGSATVDDVTAEDAGSAAIAIPSTQAPIVSRVRDEGTGVCDDAGAMELGSDDFVFEFGPNVRT
ESGSTISSASIRSLASSENGPTVEVLAMEGDTDLFGAASSNGETQNIALSMSASSDLASFSGPEFFDEYIF

Sequences:

>Translated_391_residues
MSQANKYEQQMLDLINADRAKVGLDPLVFNSDLNEAGEDHSAWMLDNDRFSHTGADGSNSRERIEASGYELEGNWKTGEN
IAWVNEAGDNGLSDEVARLHTNLMNSPEHRANLLNPDFKEIGIGIEAGDFVDDGQTLDAVFVTQNFGTTSANTVVLPDAD
TDAPSVVEPTPAVVEDTAPAEPEVTESEITAGTGFDIEQFMASRGFSIIQETTEDVEETSTGSSNTQTTRSSVEVTSVAS
GTDGPSVDVQGEGNFSGQGSATVDDVTAEDAGSAAIAIPSTQAPIVSRVRDEGTGVCDDAGAMELGSDDFVFEFGPNVRT
ESGSTISSASIRSLASSENGPTVEVLAMEGDTDLFGAASSNGETQNIALSMSASSDLASFSGPEFFDEYIF
>Mature_390_residues
SQANKYEQQMLDLINADRAKVGLDPLVFNSDLNEAGEDHSAWMLDNDRFSHTGADGSNSRERIEASGYELEGNWKTGENI
AWVNEAGDNGLSDEVARLHTNLMNSPEHRANLLNPDFKEIGIGIEAGDFVDDGQTLDAVFVTQNFGTTSANTVVLPDADT
DAPSVVEPTPAVVEDTAPAEPEVTESEITAGTGFDIEQFMASRGFSIIQETTEDVEETSTGSSNTQTTRSSVEVTSVASG
TDGPSVDVQGEGNFSGQGSATVDDVTAEDAGSAAIAIPSTQAPIVSRVRDEGTGVCDDAGAMELGSDDFVFEFGPNVRTE
SGSTISSASIRSLASSENGPTVEVLAMEGDTDLFGAASSNGETQNIALSMSASSDLASFSGPEFFDEYIF

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41068; Mature: 40937

Theoretical pI: Translated: 3.60; Mature: 3.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQANKYEQQMLDLINADRAKVGLDPLVFNSDLNEAGEDHSAWMLDNDRFSHTGADGSNS
CCCHHHHHHHHHHHHCCCCHHCCCCCEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCC
RERIEASGYELEGNWKTGENIAWVNEAGDNGLSDEVARLHTNLMNSPEHRANLLNPDFKE
HHHHCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHH
IGIGIEAGDFVDDGQTLDAVFVTQNFGTTSANTVVLPDADTDAPSVVEPTPAVVEDTAPA
HCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
EPEVTESEITAGTGFDIEQFMASRGFSIIQETTEDVEETSTGSSNTQTTRSSVEVTSVAS
CCCCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
GTDGPSVDVQGEGNFSGQGSATVDDVTAEDAGSAAIAIPSTQAPIVSRVRDEGTGVCDDA
CCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC
GAMELGSDDFVFEFGPNVRTESGSTISSASIRSLASSENGPTVEVLAMEGDTDLFGAASS
CCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCC
NGETQNIALSMSASSDLASFSGPEFFDEYIF
CCCCEEEEEEECCCCCHHHCCCHHHHHHHCC
>Mature Secondary Structure 
SQANKYEQQMLDLINADRAKVGLDPLVFNSDLNEAGEDHSAWMLDNDRFSHTGADGSNS
CCHHHHHHHHHHHHCCCCHHCCCCCEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCC
RERIEASGYELEGNWKTGENIAWVNEAGDNGLSDEVARLHTNLMNSPEHRANLLNPDFKE
HHHHCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHH
IGIGIEAGDFVDDGQTLDAVFVTQNFGTTSANTVVLPDADTDAPSVVEPTPAVVEDTAPA
HCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
EPEVTESEITAGTGFDIEQFMASRGFSIIQETTEDVEETSTGSSNTQTTRSSVEVTSVAS
CCCCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
GTDGPSVDVQGEGNFSGQGSATVDDVTAEDAGSAAIAIPSTQAPIVSRVRDEGTGVCDDA
CCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC
GAMELGSDDFVFEFGPNVRTESGSTISSASIRSLASSENGPTVEVLAMEGDTDLFGAASS
CCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCC
NGETQNIALSMSASSDLASFSGPEFFDEYIF
CCCCEEEEEEECCCCCHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA