| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678764
Identifier: 110678764
GI number: 110678764
Start: 1376723
End: 1376905
Strand: Reverse
Name: 110678764
Synonym: RD1_1447
Alternate gene names: NA
Gene position: 1376905-1376723 (Counterclockwise)
Preceding gene: 110678765
Following gene: 110678751
Centisome position: 33.31
GC content: 60.11
Gene sequence:
>183_bases ATGGTCATGCCCTCTTCGGCCAGTTCGATCATGGTGTCGAGCACCTCTTTGATCATCTCCGGGTCCAGCGCAGAGGTCGG TTCGTCAAACAACATGATCCGTGGCTTCATGCAGAGCGAGCGCGCAATGGCCACCCGCTGCTGTTGCCCGCCCGAAAGCT GCCCGGGATATTTGCCCGCCTGA
Upstream 100 bases:
>100_bases CGCCTCAGGCTCGTTCTGCTCGACGATCTGCCCGGCATCCATGAAGATCACCCGGTTGGCGACCTGACGCGCAAAGCCCA TTTCGTGGGTCACGCAAAGC
Downstream 100 bases:
>100_bases TCCGGGATTTTCACCTTTTCAAGGAAGTGCATCGCCGTTTCTTCGGCCTCTTTCTTAGGTATCTTGCGCACCCAGATCGG CGCAAGCGTGCAATTCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA
Sequences:
>Translated_60_residues MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA >Mature_60_residues MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6207; Mature: 6207
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 16.7 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 16.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA