| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is 110678765
Identifier: 110678765
GI number: 110678765
Start: 1377122
End: 1377619
Strand: Reverse
Name: 110678765
Synonym: RD1_1448
Alternate gene names: NA
Gene position: 1377619-1377122 (Counterclockwise)
Preceding gene: 110678766
Following gene: 110678764
Centisome position: 33.33
GC content: 62.85
Gene sequence:
>498_bases ATGCTTCGACTGATCCTGATGCGGCACGCGAAATCGGACTGGAACCATATCGGCACCGCTGACCACGACCGCCCGCTCAA CAAGCGCGGACGCAGGTCGGCCACTGCCTTGGGGGTCTGGCTGCGCGCGCAGGGGCACATCCCGGATGAGGTGCTGTGCT CTTCTGCCGAGCGGACCGGCCAGACGCTGATGGGGTTGCAGATCGACCCCACGCCGCCAACCCGGTTCATCAGAGCACTG TATCTGGCGGAGCCGCGCATCATGATCGAAACACTGCATGAGGCGACCGGCGTGTGCGTGCTGATGATCGGGCATAACCA CGGCATCTGCGAGTTGGCCAACCTGTTGGTGGAGTCGCCCCCGGCGCATGCGCGGTTTGCGGATTATCCGACAGGGGCAA CGCTTGTGTGCGACTTTGACGTGGGCAGTTGGACAGAGGTGGACTGGCATCAAGGCCGGGTCGTTGATTTCATCGTGCCG CGTGAATTGACCGACTGA
Upstream 100 bases:
>100_bases GTATGGCTGCGCGGCGCGGCGGGTTTGCCCGGTGTCGCAGCAATACCCGCGCACCTCGGCGCAATCGGCCTATCATATGA CCACTTTCAAAGGGTAGCGG
Downstream 100 bases:
>100_bases AACGGAAAACGCCGCCCCCATGGGACGGCGCATCCAATCAATACCAACCTCGTTCAGTGCCCGAGGATCTGGCTCAGGAA CAGTTGCGTGCGCGGGGATT
Product: phosphoglycerate mutase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLRLILMRHAKSDWNHIGTADHDRPLNKRGRRSATALGVWLRAQGHIPDEVLCSSAERTGQTLMGLQIDPTPPTRFIRAL YLAEPRIMIETLHEATGVCVLMIGHNHGICELANLLVESPPAHARFADYPTGATLVCDFDVGSWTEVDWHQGRVVDFIVP RELTD
Sequences:
>Translated_165_residues MLRLILMRHAKSDWNHIGTADHDRPLNKRGRRSATALGVWLRAQGHIPDEVLCSSAERTGQTLMGLQIDPTPPTRFIRAL YLAEPRIMIETLHEATGVCVLMIGHNHGICELANLLVESPPAHARFADYPTGATLVCDFDVGSWTEVDWHQGRVVDFIVP RELTD >Mature_165_residues MLRLILMRHAKSDWNHIGTADHDRPLNKRGRRSATALGVWLRAQGHIPDEVLCSSAERTGQTLMGLQIDPTPPTRFIRAL YLAEPRIMIETLHEATGVCVLMIGHNHGICELANLLVESPPAHARFADYPTGATLVCDFDVGSWTEVDWHQGRVVDFIVP RELTD
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 18466; Mature: 18466
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLILMRHAKSDWNHIGTADHDRPLNKRGRRSATALGVWLRAQGHIPDEVLCSSAERTG CEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCHHHHHCCHHHCC QTLMGLQIDPTPPTRFIRALYLAEPRIMIETLHEATGVCVLMIGHNHGICELANLLVESP CEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCC PAHARFADYPTGATLVCDFDVGSWTEVDWHQGRVVDFIVPRELTD CCCCEECCCCCCCEEEEECCCCCCEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure MLRLILMRHAKSDWNHIGTADHDRPLNKRGRRSATALGVWLRAQGHIPDEVLCSSAERTG CEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCHHHHHCCHHHCC QTLMGLQIDPTPPTRFIRALYLAEPRIMIETLHEATGVCVLMIGHNHGICELANLLVESP CEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCC PAHARFADYPTGATLVCDFDVGSWTEVDWHQGRVVDFIVPRELTD CCCCEECCCCCCCEEEEECCCCCCEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]