Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is crcB [H]

Identifier: 110678757

GI number: 110678757

Start: 1369608

End: 1369991

Strand: Direct

Name: crcB [H]

Synonym: RD1_1440

Alternate gene names: 110678757

Gene position: 1369608-1369991 (Clockwise)

Preceding gene: 110678756

Following gene: 110678758

Centisome position: 33.14

GC content: 59.38

Gene sequence:

>384_bases
ATGATGAAGTCTTTGATCCTTGTGGCCGCCGGGGGTGCGATTGGTGCGTCTTTGCGCTATTTGCTCGGGGCCGGCGTTTA
CCGTCTGACCGGGGGTCCAACGGGTTTTCCGGTGGCGATCATGATGGCCAATGTATTGGGGTCGATTGCCATGGGGTTTT
TCGTGGTCTGGGCGGCGCATCGCGGGCTGACGCATCTGAGCCCCTTTGTCATGACCGGCGTGCTGGGCGGTTTCACGACG
TTTTCCGCCTTTTCGCTGGAAACCGTGACATTGTTTGAGCGGGGCGAGATCTGGCAGGCGGGGCTTTATGTTGCGCTGTC
GGTCGGGCTGTCGGTATTTGGATTGATGGCGGGCCTCTGGGTCGCGCGTGGGGTATATTTATGA

Upstream 100 bases:

>100_bases
GTTGCGTCAGGAGCGGGACGACAATGCAACGTGATCCGCAGGCCCTTGCGGCGCGGGCGGAAAACTTGACAACGGGTGCT
GGACGCGGGACAGACCGCGC

Downstream 100 bases:

>100_bases
GCGCAGTGCAAACACTGACCGTCGGCGAAGACGAGGGGGACCAGCGGCTGGACCGGTGGTTCAAAAAGCAGTTTCCCCTG
ATCAGTCAGGGGCGCGTCGA

Product: CrcB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MMKSLILVAAGGAIGASLRYLLGAGVYRLTGGPTGFPVAIMMANVLGSIAMGFFVVWAAHRGLTHLSPFVMTGVLGGFTT
FSAFSLETVTLFERGEIWQAGLYVALSVGLSVFGLMAGLWVARGVYL

Sequences:

>Translated_127_residues
MMKSLILVAAGGAIGASLRYLLGAGVYRLTGGPTGFPVAIMMANVLGSIAMGFFVVWAAHRGLTHLSPFVMTGVLGGFTT
FSAFSLETVTLFERGEIWQAGLYVALSVGLSVFGLMAGLWVARGVYL
>Mature_127_residues
MMKSLILVAAGGAIGASLRYLLGAGVYRLTGGPTGFPVAIMMANVLGSIAMGFFVVWAAHRGLTHLSPFVMTGVLGGFTT
FSAFSLETVTLFERGEIWQAGLYVALSVGLSVFGLMAGLWVARGVYL

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691 [H]

Pfam domain/function: PF02537 CRCB [H]

EC number: NA

Molecular weight: Translated: 13280; Mature: 13280

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSLILVAAGGAIGASLRYLLGAGVYRLTGGPTGFPVAIMMANVLGSIAMGFFVVWAAH
CCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGLTHLSPFVMTGVLGGFTTFSAFSLETVTLFERGEIWQAGLYVALSVGLSVFGLMAGLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VARGVYL
HHHCCCC
>Mature Secondary Structure
MMKSLILVAAGGAIGASLRYLLGAGVYRLTGGPTGFPVAIMMANVLGSIAMGFFVVWAAH
CCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGLTHLSPFVMTGVLGGFTTFSAFSLETVTLFERGEIWQAGLYVALSVGLSVFGLMAGLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VARGVYL
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA