| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is folK [H]
Identifier: 110678678
GI number: 110678678
Start: 1306678
End: 1307292
Strand: Direct
Name: folK [H]
Synonym: RD1_1357
Alternate gene names: 110678678
Gene position: 1306678-1307292 (Clockwise)
Preceding gene: 110678667
Following gene: 110678679
Centisome position: 31.61
GC content: 56.91
Gene sequence:
>615_bases TTGACTGTGCCGCAAGTGACAAGACAGGGGAAAATTGGCAAAAAATCGCCACAATTACGGTCACTTGCACTGATTGCCGT TGGGTCAAACCAAGGCTTACGCAACGGAACCCCACACGATACCGTACTGAATGCATTGAAAGAATTTCCCGTTAAGGTTG GATCGATTCGGGCTTTCAGCAGGCTGTTTCGCACGGCTGCCTTCCCGGCGGGATCCGGCCCGGATTTCGTCAATGCGGCC TTTGCCCTTGAGACGGAACTGGATGCAGCCGACCTTTTGAGCCATCTTCACGAGGTTGAATCACTGTTCAGGCGCAACCG GACCAAGCGGTGGGGGCCGCGCACTCTGGACCTTGATCTGATCGCGATGGCGGATCAGGTTTTGCCTGATCGCGAGACAT TCGATCACTGGGCGCAGTTGCCGATCGATCAACAGATGACCACATCGCCGGAGCGGTTGATCCTGCCGCACCCGCGTGTG CATGAGCGGGCATTTGTCCTGATCCCGCTGGCGGATGTGGCACCGGAATGGCGTCACCCGGTCCGCGGTGTCAGCGTTCA GGAGATGGTCGATGCCTTGCCGGAAAACCTCAAAAACGAAGTCGAACCGCTGTAA
Upstream 100 bases:
>100_bases TGTAAAACATCTAAGTGTCCTTTCGATTGGTCAGGCGCTGGTGCTCGTAAAAAGTTGTGATAAAATTTCTGCACCCGACA ATTGAACAAAATAGGGTTTT
Downstream 100 bases:
>100_bases TTCTTTGCTTGTAAAGCGGTGCCAACCGACCTAAATAACGGACTTCCGCCCCTACTCTGTCTGATGGAGATGTTTCATGG CCCGCGTCACAGTCGAAGAT
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTVPQVTRQGKIGKKSPQLRSLALIAVGSNQGLRNGTPHDTVLNALKEFPVKVGSIRAFSRLFRTAAFPAGSGPDFVNAA FALETELDAADLLSHLHEVESLFRRNRTKRWGPRTLDLDLIAMADQVLPDRETFDHWAQLPIDQQMTTSPERLILPHPRV HERAFVLIPLADVAPEWRHPVRGVSVQEMVDALPENLKNEVEPL
Sequences:
>Translated_204_residues MTVPQVTRQGKIGKKSPQLRSLALIAVGSNQGLRNGTPHDTVLNALKEFPVKVGSIRAFSRLFRTAAFPAGSGPDFVNAA FALETELDAADLLSHLHEVESLFRRNRTKRWGPRTLDLDLIAMADQVLPDRETFDHWAQLPIDQQMTTSPERLILPHPRV HERAFVLIPLADVAPEWRHPVRGVSVQEMVDALPENLKNEVEPL >Mature_203_residues TVPQVTRQGKIGKKSPQLRSLALIAVGSNQGLRNGTPHDTVLNALKEFPVKVGSIRAFSRLFRTAAFPAGSGPDFVNAAF ALETELDAADLLSHLHEVESLFRRNRTKRWGPRTLDLDLIAMADQVLPDRETFDHWAQLPIDQQMTTSPERLILPHPRVH ERAFVLIPLADVAPEWRHPVRGVSVQEMVDALPENLKNEVEPL
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=162, Percent_Identity=33.9506172839506, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 22811; Mature: 22680
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPQVTRQGKIGKKSPQLRSLALIAVGSNQGLRNGTPHDTVLNALKEFPVKVGSIRAFS CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH RLFRTAAFPAGSGPDFVNAAFALETELDAADLLSHLHEVESLFRRNRTKRWGPRTLDLDL HHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IAMADQVLPDRETFDHWAQLPIDQQMTTSPERLILPHPRVHERAFVLIPLADVAPEWRHP HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHCCHHHCCC VRGVSVQEMVDALPENLKNEVEPL CCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVPQVTRQGKIGKKSPQLRSLALIAVGSNQGLRNGTPHDTVLNALKEFPVKVGSIRAFS CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH RLFRTAAFPAGSGPDFVNAAFALETELDAADLLSHLHEVESLFRRNRTKRWGPRTLDLDL HHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IAMADQVLPDRETFDHWAQLPIDQQMTTSPERLILPHPRVHERAFVLIPLADVAPEWRHP HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHCCHHHCCC VRGVSVQEMVDALPENLKNEVEPL CCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]