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The map label for this gene is atpX

Identifier: 110678646

GI number: 110678646

Start: 1274665

End: 1275195

Strand: Direct

Name: atpX

Synonym: RD1_1324

Alternate gene names: 110678646

Gene position: 1274665-1275195 (Clockwise)

Preceding gene: 110678645

Following gene: 110678647

Centisome position: 30.84

GC content: 58.19

Gene sequence:

>531_bases
ATGGCAACAGAGACAAACGGCGCTGATGTCGCGGCTTCCAGCCCGGGCATGCCACAGTTGGATTTTTCCACTTGGGGGAA
CCAGATATTCTGGTTGGTGATCACGCTCGTGATCATCTACATGGTGCTTTCGAAGGTCGCTCTGCCACGGATCGCGGCGA
TCCTGTCCGAGCGTCAGGGCACCATTACAAATGACATCGCCACGGCTGAAGACTTCAAAGCCAAGGCGAAAGACGCCGAG
GCCGCCTATGAAAAGGCGCTGGCGGATGCGCGTGCCGAAGCGCAGCGCATTGTCGCCGAGGCCAAGGCTGACATTCAGAG
CGATCTGGATGTAGCGATATCCAAGGCAGATGCGGAAATTGCGGCAAAGGCAGCGGAATCCGAAAAAGCCATCGCAGAGA
TACGTGCCGGTGCCGCCGAAGCGATTCAACAGGTCGCCAAGGACACGGCACAGGAAATCGTTGCCACATTCGGCGGCAAG
GCAGATGCCAAGGCCGTGGATGCAGCGGTCGACGGCCAGTTGAAAGGATGA

Upstream 100 bases:

>100_bases
CTGATGTTCGCTGTCTAAGCAACAGACAGACGAAATCCTTACGGTCGGGCAGTGCGGTTGACGCGCTGCCCGATGTAACG
GCCCCTTGCAGGAGATAACA

Downstream 100 bases:

>100_bases
AGCAGATGCGGAACTTGTCACGTCTTTCAGTGCTTGCCCTTGCCATGTTGGCAGCCAACCCTGCCTTTGCGGCGGGGGGC
GGAATATCCCTAAAGAACAC

Product: F0F1 ATP synthase subunit B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b'; ATPase subunit II; F-type ATPase subunit b'; F-ATPase subunit b'

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MATETNGADVAASSPGMPQLDFSTWGNQIFWLVITLVIIYMVLSKVALPRIAAILSERQGTITNDIATAEDFKAKAKDAE
AAYEKALADARAEAQRIVAEAKADIQSDLDVAISKADAEIAAKAAESEKAIAEIRAGAAEAIQQVAKDTAQEIVATFGGK
ADAKAVDAAVDGQLKG

Sequences:

>Translated_176_residues
MATETNGADVAASSPGMPQLDFSTWGNQIFWLVITLVIIYMVLSKVALPRIAAILSERQGTITNDIATAEDFKAKAKDAE
AAYEKALADARAEAQRIVAEAKADIQSDLDVAISKADAEIAAKAAESEKAIAEIRAGAAEAIQQVAKDTAQEIVATFGGK
ADAKAVDAAVDGQLKG
>Mature_175_residues
ATETNGADVAASSPGMPQLDFSTWGNQIFWLVITLVIIYMVLSKVALPRIAAILSERQGTITNDIATAEDFKAKAKDAEA
AYEKALADARAEAQRIVAEAKADIQSDLDVAISKADAEIAAKAAESEKAIAEIRAGAAEAIQQVAKDTAQEIVATFGGKA
DAKAVDAAVDGQLKG

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPX_ROSDO (Q16AM6)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681653.1
- STRING:   Q16AM6
- GeneID:   4197377
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1324
- NMPDR:   fig|375451.6.peg.1239
- eggNOG:   COG0711
- HOGENOM:   HBG656755
- OMA:   NQIFWLV
- ProtClustDB:   PRK13454
- BioCyc:   RDEN375451:RD1_1324-MONOMER
- HAMAP:   MF_01399
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18319; Mature: 18188

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x149413e4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATETNGADVAASSPGMPQLDFSTWGNQIFWLVITLVIIYMVLSKVALPRIAAILSERQG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TITNDIATAEDFKAKAKDAEAAYEKALADARAEAQRIVAEAKADIQSDLDVAISKADAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAAESEKAIAEIRAGAAEAIQQVAKDTAQEIVATFGGKADAKAVDAAVDGQLKG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
>Mature Secondary Structure 
ATETNGADVAASSPGMPQLDFSTWGNQIFWLVITLVIIYMVLSKVALPRIAAILSERQG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TITNDIATAEDFKAKAKDAEAAYEKALADARAEAQRIVAEAKADIQSDLDVAISKADAEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAAESEKAIAEIRAGAAEAIQQVAKDTAQEIVATFGGKADAKAVDAAVDGQLKG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA