Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678635

Identifier: 110678635

GI number: 110678635

Start: 1266763

End: 1267059

Strand: Reverse

Name: 110678635

Synonym: RD1_1312

Alternate gene names: NA

Gene position: 1267059-1266763 (Counterclockwise)

Preceding gene: 110678636

Following gene: 110678634

Centisome position: 30.66

GC content: 56.57

Gene sequence:

>297_bases
ATGAGCGACGCCGCAACCCGTGCCGCAAGCCTGTTGAAAGAGCATCGCGCGTCCATCGACCGTCTGGATGCCATCCTCGT
CTACACCCTCGGCGAGCGGTTCAAACATACGCAGGCTGTGGGGAAACTCAAAGCCGAACACGACCTTCCCCCGTCCGATC
CCTCGCGTGAAGCGGCACAGATCGAACGGCTCGAAGATTTGGCAAACCGGGCCGACCTCGACCCGGAATTTGCCAAGAAG
TTTCTTAACTTCATCATCGCTGAAGTCATTCAGCACCACCACAAACACCAATCATAA

Upstream 100 bases:

>100_bases
TGACTGATCGTAAAACATGCGCGCGCCGCGCACCGACGCAATACCGACGTATCACCGACGTGATACCGACCGCCCAAAAT
CACCGTTCCGGAGGCCCCAA

Downstream 100 bases:

>100_bases
GGCGCATGACGCGCCCCACATATCCAAAGGAAAAAAGACCATGGCCATGAAAATTCGTCTCGCCCGCGGCGGCTCCAAAA
AGCGCCCCTTCTACCGTATC

Product: chorismate mutase

Products: prephenate

Alternate protein names: Hydroxyphenylpyruvate Synthase; Monofunctional Chorismate Mutase; Chorismate Mutase TyrA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSDAATRAASLLKEHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPSREAAQIERLEDLANRADLDPEFAKK
FLNFIIAEVIQHHHKHQS

Sequences:

>Translated_98_residues
MSDAATRAASLLKEHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPSREAAQIERLEDLANRADLDPEFAKK
FLNFIIAEVIQHHHKHQS
>Mature_97_residues
SDAATRAASLLKEHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPSREAAQIERLEDLANRADLDPEFAKKF
LNFIIAEVIQHHHKHQS

Specific function: Unknown

COG id: COG1605

COG function: function code E; Chorismate mutase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.5

Molecular weight: Translated: 11091; Mature: 10959

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAATRAASLLKEHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPSREAAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IERLEDLANRADLDPEFAKKFLNFIIAEVIQHHHKHQS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDAATRAASLLKEHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPSREAAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IERLEDLANRADLDPEFAKKFLNFIIAEVIQHHHKHQS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: chorismate

Specific reaction: chorismate = prephenate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA