| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678636
Identifier: 110678636
GI number: 110678636
Start: 1267153
End: 1267758
Strand: Reverse
Name: 110678636
Synonym: RD1_1313
Alternate gene names: NA
Gene position: 1267758-1267153 (Counterclockwise)
Preceding gene: 110678637
Following gene: 110678635
Centisome position: 30.67
GC content: 61.39
Gene sequence:
>606_bases GTGAGCGACACATTGATCCCGATCATCGAAACCAAACGCCTGATCCTGCGCGGCCCAGAGCCCGAGGATTACCCGGATTT CAAAGCGACCTTCACCAGCTACCGCGCGCGCTTCATGGGCGGCCCGCTCAACGCGTATGAGGCATGGATGCTCTATGCCG CTGAAATCGGCCATTGGCAGATTCGCGGGTACGGCATGTGGATGATCCACGACAAGGACACGGATGAAACCTACGGCATG GCAGGCGGCTGGAAGCCGGCGAAATGGCCCGAAGCGGAAATCGCATGGGTGATCTGGCCTGACAAGAACGGCAAGGGCTA CGCGCTTGAGGCGACCCATGCGGTGCGCAATTATCTCTACGGGTTTTGCGGCTGGGACACGGCGGTCAGCTACATCGACC CCAAGAACCTCGACAGCATCCGGCTGGCCGAACGTCTGGGCGCGATCAAGGATCACGACGCGGCCACCATCGACGGCAAC GACGCGGTTTATCGCCACCCGGCTCCGGCGGATCTGCGCGGCTCGCAACTGTCCCATGGCATCGAGATGGAGATCAGCCA CTACGCCGATCCGCTCTTCAAACCGAAAGGCTGGGCCCTTGACTGA
Upstream 100 bases:
>100_bases CGCTGGCCCGGCGCATGGGGGCTGTCTTTGAACGAAGCTTCACCCATTCGGTCGAGGGCGAGTTGCAAATCTGGCGCCAC CTGCCGCCGGAGGCGTTGAC
Downstream 100 bases:
>100_bases TCGTAAAACATGCGCGCGCCGCGCACCGACGCAATACCGACGTATCACCGACGTGATACCGACCGCCCAAAATCACCGTT CCGGAGGCCCCAAATGAGCG
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; Acetyltranferase; Ribosomal-Protein-Alanine Acetyltransferase; GNAT Family Acetyltransferase; Acetyl Transferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSDTLIPIIETKRLILRGPEPEDYPDFKATFTSYRARFMGGPLNAYEAWMLYAAEIGHWQIRGYGMWMIHDKDTDETYGM AGGWKPAKWPEAEIAWVIWPDKNGKGYALEATHAVRNYLYGFCGWDTAVSYIDPKNLDSIRLAERLGAIKDHDAATIDGN DAVYRHPAPADLRGSQLSHGIEMEISHYADPLFKPKGWALD
Sequences:
>Translated_201_residues MSDTLIPIIETKRLILRGPEPEDYPDFKATFTSYRARFMGGPLNAYEAWMLYAAEIGHWQIRGYGMWMIHDKDTDETYGM AGGWKPAKWPEAEIAWVIWPDKNGKGYALEATHAVRNYLYGFCGWDTAVSYIDPKNLDSIRLAERLGAIKDHDAATIDGN DAVYRHPAPADLRGSQLSHGIEMEISHYADPLFKPKGWALD >Mature_200_residues SDTLIPIIETKRLILRGPEPEDYPDFKATFTSYRARFMGGPLNAYEAWMLYAAEIGHWQIRGYGMWMIHDKDTDETYGMA GGWKPAKWPEAEIAWVIWPDKNGKGYALEATHAVRNYLYGFCGWDTAVSYIDPKNLDSIRLAERLGAIKDHDAATIDGND AVYRHPAPADLRGSQLSHGIEMEISHYADPLFKPKGWALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22796; Mature: 22665
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLIPIIETKRLILRGPEPEDYPDFKATFTSYRARFMGGPLNAYEAWMLYAAEIGHWQ CCCCEEEHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCEE IRGYGMWMIHDKDTDETYGMAGGWKPAKWPEAEIAWVIWPDKNGKGYALEATHAVRNYLY EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHE GFCGWDTAVSYIDPKNLDSIRLAERLGAIKDHDAATIDGNDAVYRHPAPADLRGSQLSHG EEECHHHEEEECCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCC IEMEISHYADPLFKPKGWALD EEEEEHHHCCCCCCCCCCCCC >Mature Secondary Structure SDTLIPIIETKRLILRGPEPEDYPDFKATFTSYRARFMGGPLNAYEAWMLYAAEIGHWQ CCCEEEHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCEE IRGYGMWMIHDKDTDETYGMAGGWKPAKWPEAEIAWVIWPDKNGKGYALEATHAVRNYLY EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHE GFCGWDTAVSYIDPKNLDSIRLAERLGAIKDHDAATIDGNDAVYRHPAPADLRGSQLSHG EEECHHHEEEECCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCC IEMEISHYADPLFKPKGWALD EEEEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA