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The map label for this gene is 110678611

Identifier: 110678611

GI number: 110678611

Start: 1249272

End: 1249844

Strand: Direct

Name: 110678611

Synonym: RD1_1287

Alternate gene names: NA

Gene position: 1249272-1249844 (Clockwise)

Preceding gene: 110678610

Following gene: 110678612

Centisome position: 30.23

GC content: 56.89

Gene sequence:

>573_bases
ATGATACATCAGGCTATAATACGGCTGGCCCGGAGCACGGCGCTCATCGGGGGCTTTCTTCTGGTGGCGCTGATCATAAT
GACCACGGTGTCGATCGTCGGTCGGTCGCTTGGCGATATCTTGCACTCGGATTTTGCGGCCCATGCCTTGGGCGGTTTTG
CGCAAGGAATGCGCGACCTCGGGCTTGGCGAAGTCAAAGGCAGCTACGAATTGCTGGAGGCTGGCGTCGCCTTTGCGATC
TTTTCCTTCTTTCCGATCTGTCAATTGTACACCGGTCATGCCACGGTCGATGTGTTCACGTCACGGCTGCCGCAGGCTCT
GACGCGTCACCTCATGGCATTTTGGGAGGTGATCCTGACCGCCTGTCTGATCCTGATCAGCGTGCAGCTTTTTGGCGGGG
TGCAAAGATATTATGGCAATGGCGAAACGACGTTGTTCTTGCAGTTTCCCCTCTGGTGGGCCTATGCGGCCAGTTTTGCG
GCTTCTGTTGTGACCTGCATCGTGGCGGTCTATTGTGCGATTATGCGCCTGTGTGAAAGCGTGACGGGCCGCAGCCTGTT
GCCGCAGGTATAG

Upstream 100 bases:

>100_bases
GATTGACGAGGCGCGGATGTTGATTGATCAATACACCGAATAACCCCGGACAGGTGCTTGCGACTATGCCTGCCCCCAGA
CGCGCCCGGCAGCGCAGATC

Downstream 100 bases:

>100_bases
CCCTTTAATGACCGCGTTTCTTGGCCTCTTACCCTTTGCCCAGATGGACCGGCTCGAACTTGGGTTCTGGTCGTTTCTGG
TGCTGCTGGGCATGGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MIHQAIIRLARSTALIGGFLLVALIIMTTVSIVGRSLGDILHSDFAAHALGGFAQGMRDLGLGEVKGSYELLEAGVAFAI
FSFFPICQLYTGHATVDVFTSRLPQALTRHLMAFWEVILTACLILISVQLFGGVQRYYGNGETTLFLQFPLWWAYAASFA
ASVVTCIVAVYCAIMRLCESVTGRSLLPQV

Sequences:

>Translated_190_residues
MIHQAIIRLARSTALIGGFLLVALIIMTTVSIVGRSLGDILHSDFAAHALGGFAQGMRDLGLGEVKGSYELLEAGVAFAI
FSFFPICQLYTGHATVDVFTSRLPQALTRHLMAFWEVILTACLILISVQLFGGVQRYYGNGETTLFLQFPLWWAYAASFA
ASVVTCIVAVYCAIMRLCESVTGRSLLPQV
>Mature_190_residues
MIHQAIIRLARSTALIGGFLLVALIIMTTVSIVGRSLGDILHSDFAAHALGGFAQGMRDLGLGEVKGSYELLEAGVAFAI
FSFFPICQLYTGHATVDVFTSRLPQALTRHLMAFWEVILTACLILISVQLFGGVQRYYGNGETTLFLQFPLWWAYAASFA
ASVVTCIVAVYCAIMRLCESVTGRSLLPQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20641; Mature: 20641

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHQAIIRLARSTALIGGFLLVALIIMTTVSIVGRSLGDILHSDFAAHALGGFAQGMRDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGEVKGSYELLEAGVAFAIFSFFPICQLYTGHATVDVFTSRLPQALTRHLMAFWEVILT
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLILISVQLFGGVQRYYGNGETTLFLQFPLWWAYAASFAASVVTCIVAVYCAIMRLCES
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGRSLLPQV
HCCCCCCCCC
>Mature Secondary Structure
MIHQAIIRLARSTALIGGFLLVALIIMTTVSIVGRSLGDILHSDFAAHALGGFAQGMRDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGEVKGSYELLEAGVAFAIFSFFPICQLYTGHATVDVFTSRLPQALTRHLMAFWEVILT
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLILISVQLFGGVQRYYGNGETTLFLQFPLWWAYAASFAASVVTCIVAVYCAIMRLCES
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGRSLLPQV
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA