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The map label for this gene is dctP [H]

Identifier: 110678610

GI number: 110678610

Start: 1248177

End: 1249214

Strand: Direct

Name: dctP [H]

Synonym: RD1_1286

Alternate gene names: 110678610

Gene position: 1248177-1249214 (Clockwise)

Preceding gene: 110678609

Following gene: 110678611

Centisome position: 30.2

GC content: 59.44

Gene sequence:

>1038_bases
ATGATTTCACGTAAGCGGTTTTTGAACCTGGCTGCGGCCGCCGTGATGGCCTTGGGCGGTGGCGCGGGGGGCGTGTCGGC
GCAAGAGGTCACACTGACCCTGCACCAGTTTTTGCCGCCACAGGCAAATGTGCCGAAACTGATCCTCGATGTCTGGGCGG
ACAACGTCGAAGAGGCAAGCGCGGGGCGCATCAAGATCGACCGTTTTCCGTCAATGCAGCTTGGCGGGCGTCCACCGGAG
CTGATTGATCAGGCGATTGACGGCGTGGCGGATGTGGTCTGGACCGTGGTCGGCTATACGCCGGGCCGTTTTCCACGGAC
CGAAGTGTTTGAACTGCCCTTCATGATGACCAATGCCCGTGCGGCGTCCCGCGCTTATTGGGAAATGTTTGAAACCCACA
TGCGGGACGCGGATTTCAAGGATGTCGAGATCCTCGGGACTTGGGTGCACGGGCCGGGCATCATCCATTCGAACCGGGAA
GTCCGCACGCCCGCCGATATGGAAGGGATGAAAATCCGTGGCGGCTCGCGGCTTGTGAATTCGCTGCTGGAGAAGGTCGG
GGCCGCGCCGGTAGGCATGCCCGTTCCGGCAGTGCCTGAGGGACTGTCCAAAGGTGTCATCGACGGCACCACGATCCCCT
GGGAAGTGACCACGGCGCTGAAAATCCCCGAGCTGGTGGACAATCACACCGAATTCACCGGTAATGCGCTCTATGTTCTG
ACCTTTGTGCTGGCCATGAACAAAGACCGCTATAACAGCCTGCCCGATGACCTGCGCCAGATCATTGACGATAATTCCGG
GCTTGAATTTTCTGTTTTTGCGGGCGGTGTCATGGAAGACAATGACGCACCCGCGCGCCAGTTGGCGGCGGACCGGGGCA
ATACAATCGTGACCCTGACGGCAGAGGAGGCACAGGCATGGCGCGATGTCGCCGCCCCCATCTATGACGAATGGGTCGCG
GAAATGTCCGAAAAGGGCATTGACGGTCAGGCGCTGATTGACGAGGCGCGGATGTTGATTGATCAATACACCGAATAA

Upstream 100 bases:

>100_bases
GATGGGTGACAAGCTTTTCCATCTGGCTTAGCTTTTCACTTGATGGTCAGGTCAGTTGTGTGAACACGCCAACCAGCTGC
TCGGGGGGAGAACAGATACC

Downstream 100 bases:

>100_bases
CCCCGGACAGGTGCTTGCGACTATGCCTGCCCCCAGACGCGCCCGGCAGCGCAGATCATGATACATCAGGCTATAATACG
GCTGGCCCGGAGCACGGCGC

Product: C4-dicarboxylate-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MISRKRFLNLAAAAVMALGGGAGGVSAQEVTLTLHQFLPPQANVPKLILDVWADNVEEASAGRIKIDRFPSMQLGGRPPE
LIDQAIDGVADVVWTVVGYTPGRFPRTEVFELPFMMTNARAASRAYWEMFETHMRDADFKDVEILGTWVHGPGIIHSNRE
VRTPADMEGMKIRGGSRLVNSLLEKVGAAPVGMPVPAVPEGLSKGVIDGTTIPWEVTTALKIPELVDNHTEFTGNALYVL
TFVLAMNKDRYNSLPDDLRQIIDDNSGLEFSVFAGGVMEDNDAPARQLAADRGNTIVTLTAEEAQAWRDVAAPIYDEWVA
EMSEKGIDGQALIDEARMLIDQYTE

Sequences:

>Translated_345_residues
MISRKRFLNLAAAAVMALGGGAGGVSAQEVTLTLHQFLPPQANVPKLILDVWADNVEEASAGRIKIDRFPSMQLGGRPPE
LIDQAIDGVADVVWTVVGYTPGRFPRTEVFELPFMMTNARAASRAYWEMFETHMRDADFKDVEILGTWVHGPGIIHSNRE
VRTPADMEGMKIRGGSRLVNSLLEKVGAAPVGMPVPAVPEGLSKGVIDGTTIPWEVTTALKIPELVDNHTEFTGNALYVL
TFVLAMNKDRYNSLPDDLRQIIDDNSGLEFSVFAGGVMEDNDAPARQLAADRGNTIVTLTAEEAQAWRDVAAPIYDEWVA
EMSEKGIDGQALIDEARMLIDQYTE
>Mature_345_residues
MISRKRFLNLAAAAVMALGGGAGGVSAQEVTLTLHQFLPPQANVPKLILDVWADNVEEASAGRIKIDRFPSMQLGGRPPE
LIDQAIDGVADVVWTVVGYTPGRFPRTEVFELPFMMTNARAASRAYWEMFETHMRDADFKDVEILGTWVHGPGIIHSNRE
VRTPADMEGMKIRGGSRLVNSLLEKVGAAPVGMPVPAVPEGLSKGVIDGTTIPWEVTTALKIPELVDNHTEFTGNALYVL
TFVLAMNKDRYNSLPDDLRQIIDDNSGLEFSVFAGGVMEDNDAPARQLAADRGNTIVTLTAEEAQAWRDVAAPIYDEWVA
EMSEKGIDGQALIDEARMLIDQYTE

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=214, Percent_Identity=26.1682242990654, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37722; Mature: 37722

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRKRFLNLAAAAVMALGGGAGGVSAQEVTLTLHQFLPPQANVPKLILDVWADNVEEAS
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHCCCCCCCHHHHHHHHHCCCCCCC
AGRIKIDRFPSMQLGGRPPELIDQAIDGVADVVWTVVGYTPGRFPRTEVFELPFMMTNAR
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCH
AASRAYWEMFETHMRDADFKDVEILGTWVHGPGIIHSNREVRTPADMEGMKIRGGSRLVN
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCEEECCHHHHHH
SLLEKVGAAPVGMPVPAVPEGLSKGVIDGTTIPWEVTTALKIPELVDNHTEFTGNALYVL
HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEHHHHHCHHHHCCCCCCCCCHHHHH
TFVLAMNKDRYNSLPDDLRQIIDDNSGLEFSVFAGGVMEDNDAPARQLAADRGNTIVTLT
HHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEECCCCCCHHHHHHCCCCEEEEEE
AEEAQAWRDVAAPIYDEWVAEMSEKGIDGQALIDEARMLIDQYTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISRKRFLNLAAAAVMALGGGAGGVSAQEVTLTLHQFLPPQANVPKLILDVWADNVEEAS
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHCCCCCCCHHHHHHHHHCCCCCCC
AGRIKIDRFPSMQLGGRPPELIDQAIDGVADVVWTVVGYTPGRFPRTEVFELPFMMTNAR
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCH
AASRAYWEMFETHMRDADFKDVEILGTWVHGPGIIHSNREVRTPADMEGMKIRGGSRLVN
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCEEECCHHHHHH
SLLEKVGAAPVGMPVPAVPEGLSKGVIDGTTIPWEVTTALKIPELVDNHTEFTGNALYVL
HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEHHHHHCHHHHCCCCCCCCCHHHHH
TFVLAMNKDRYNSLPDDLRQIIDDNSGLEFSVFAGGVMEDNDAPARQLAADRGNTIVTLT
HHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEECCCCCCHHHHHHCCCCEEEEEE
AEEAQAWRDVAAPIYDEWVAEMSEKGIDGQALIDEARMLIDQYTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]