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The map label for this gene is blc [H]

Identifier: 110678561

GI number: 110678561

Start: 1198762

End: 1199289

Strand: Reverse

Name: blc [H]

Synonym: RD1_1234

Alternate gene names: 110678561

Gene position: 1199289-1198762 (Counterclockwise)

Preceding gene: 110678564

Following gene: 110678560

Centisome position: 29.02

GC content: 60.8

Gene sequence:

>528_bases
ATGCCCTACAGACTTGCCCTATGCGCCCTTCTTCTGTTGACCGCCTGCGGCACACAATATCGCGACACCAGCGTGCCAAT
CGTCGCGCAGGCCGATTTTGACACGGCGCAGTATCTTGGCAAATGGTATGAAATCGCGCGCTATCCCGTGTCCTTTCAGG
AAGGCTGCACCGCGACCACAGCCACCTATCAAACCCTTGATGCCAATAGGATTTCCGTGGTGAACCAATGTCGCCAGGGC
GATCCGTCCGGACCGCTCGATCAGATCAAGGGCAATGCACGCATCGAGGCGCCGGGCCAGCTTTCCGTGCAGTTCAACCG
CATCCCGTTCCTGCGCGCGCCCTATTGGGTGTTGTGGGTCGATCAGGACTACCAGACGGCGGTCGTCGGTGTGCCCAACG
GCCGCGCCGGCTGGATTCTCGCCCGCAGCCCGGACATAACGCCCGGGACACGCGCCAAAGCAGATGAGATCCTGAGCCAG
AATGGCTATGACCCCGCCGCACTTATCGACACGGTTCATGCGCCGTAA

Upstream 100 bases:

>100_bases
TGATACCGACGCCGTGCCGACCCTGTGCCGATGGCACTTTTGCCTGTCGCAAAAGGCGCCTCTGCGCTAGGGTTTCCGCA
CTCAACCGGACGGAGATTTC

Downstream 100 bases:

>100_bases
GAGCCCCGCGTCATGTTCCAGATCATTATGAAAACAAGGGGCTTGGCGGTCGCGCTGACGCAGAAAAAACGGGCCGATAC
AAGATCGACCCGTTGAGTTG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MPYRLALCALLLLTACGTQYRDTSVPIVAQADFDTAQYLGKWYEIARYPVSFQEGCTATTATYQTLDANRISVVNQCRQG
DPSGPLDQIKGNARIEAPGQLSVQFNRIPFLRAPYWVLWVDQDYQTAVVGVPNGRAGWILARSPDITPGTRAKADEILSQ
NGYDPAALIDTVHAP

Sequences:

>Translated_175_residues
MPYRLALCALLLLTACGTQYRDTSVPIVAQADFDTAQYLGKWYEIARYPVSFQEGCTATTATYQTLDANRISVVNQCRQG
DPSGPLDQIKGNARIEAPGQLSVQFNRIPFLRAPYWVLWVDQDYQTAVVGVPNGRAGWILARSPDITPGTRAKADEILSQ
NGYDPAALIDTVHAP
>Mature_174_residues
PYRLALCALLLLTACGTQYRDTSVPIVAQADFDTAQYLGKWYEIARYPVSFQEGCTATTATYQTLDANRISVVNQCRQGD
PSGPLDQIKGNARIEAPGQLSVQFNRIPFLRAPYWVLWVDQDYQTAVVGVPNGRAGWILARSPDITPGTRAKADEILSQN
GYDPAALIDTVHAP

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=158, Percent_Identity=32.9113924050633, Blast_Score=84, Evalue=7e-17,
Organism=Escherichia coli, GI1790592, Length=170, Percent_Identity=30, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574799, Length=151, Percent_Identity=35.0993377483444, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19234; Mature: 19103

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRLALCALLLLTACGTQYRDTSVPIVAQADFDTAQYLGKWYEIARYPVSFQEGCTATT
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCH
ATYQTLDANRISVVNQCRQGDPSGPLDQIKGNARIEAPGQLSVQFNRIPFLRAPYWVLWV
HEEEECCCCHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCEEEEECCCCEEECCEEEEEE
DQDYQTAVVGVPNGRAGWILARSPDITPGTRAKADEILSQNGYDPAALIDTVHAP
ECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHEECCCC
>Mature Secondary Structure 
PYRLALCALLLLTACGTQYRDTSVPIVAQADFDTAQYLGKWYEIARYPVSFQEGCTATT
CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCH
ATYQTLDANRISVVNQCRQGDPSGPLDQIKGNARIEAPGQLSVQFNRIPFLRAPYWVLWV
HEEEECCCCHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCEEEEECCCCEEECCEEEEEE
DQDYQTAVVGVPNGRAGWILARSPDITPGTRAKADEILSQNGYDPAALIDTVHAP
ECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]