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The map label for this gene is yjjK [H]

Identifier: 110678564

GI number: 110678564

Start: 1201858

End: 1203513

Strand: Reverse

Name: yjjK [H]

Synonym: RD1_1237

Alternate gene names: 110678564

Gene position: 1203513-1201858 (Counterclockwise)

Preceding gene: 110678571

Following gene: 110678561

Centisome position: 29.12

GC content: 60.57

Gene sequence:

>1656_bases
ATGGCCGCCTATCAATACGTCTATCACATGTCCGGCGTTTCCAAGACCTACCCCGGGGGCAAGAAATGCTTTGAGAACAT
CCACCTGAACTTCCTGCCCGGCGTGAAGATCGGCGTCGTGGGCGTGAACGGCGCGGGTAAATCCACCCTGATGAAAATCA
TGGCCGGTCTGGACACAGAATTCTCCGGCGAGGCCTGGCATGCCGAGGGGGCGACCGTCGGTTATCTGCCGCAGGAACCC
AAACTGGACGAGACGCTCAGCGTGCGCGAAAACGTCATGCTCGCCGTGGCGGACAAAAAGGCGATCCTTGATCGCTACAA
CGAACTGGCGATGAACTACTCCGATGAGACCGCGGACGAGATGGCCGCCCTGCAGGACCAGATCGACGCCGACAACCTCT
GGGACCTCGACAGCCAGATCGACGTCAGCATGGAAGCGCTGCGCTGCCCGCCCGATGATGCCGACGTCACCACGCTCTCG
GGCGGTGAGGCCCGCCGTGTCGCCTTGTGCAAGCTGCTGCTCGAAGCGCCCGATATGCTGCTGCTGGACGAACCGACCAA
CCACCTCGATGCGGAAACCATCGCATGGCTGCAACAGCACCTCATCGACTACAAGGGCACCATCCTGATCGTCACCCACG
ACCGCTATTTCCTCGATGACATCACCGGCTGGATTCTGGAACTCGACCGCGGCAAGGGCATCCCTTACGAGGGCAATTAC
TCCGACTGGCTCGAACAGAAAGCCAAACGCCTCGCCCAGGAAGCACGCGAGGACAAATCCCGCCAGAAAACGCTTGAGCG
CGAACTCGAATGGATGCGCCAGGGCGCCAAGGCCCGCCAGGCCAAATCCAAGGCCCGCATCAACGCCTATAACGAGATGG
CCGAACAGTCAGAGCGCGAAAAACTCTCCCGCGCACAGATCGTCATTCCCAACGGCCAGCGCCTTGGCTCCAAGGTGATC
GAAGTGCAGGGCCTGCAAAAAGCCATGGGTGACAAACTGCTGGTCGAAGGGCTGGATTTCTCCCTGCCCCCCGGCGGCAT
CGTCGGCGTGATCGGCCCCAACGGCGCGGGTAAATCCACGCTGTTCAAGATGCTCACGGGACAATTGGAACCGGACGCAG
GCACCATCGAATACGGCGACACGGTCGATCTGTCCTACGTGGATCAAAGCCGCGATGATCTGGCCGAAAACGACACCGTC
TGGGAAGCCATCAGCAGCGGCGCGGAACTGATCCAGCTGGGCGATGCCGAGGTGAACTCCCGCGCCTATTGCTCATCGTT
CAACTTCAAGGGCGGCGATCAGCAGAAAAAGGTCGGACTGCTCTCGGGGGGGGAACGCAACCGCGTGCACATGGCGCGCC
TGCTGAAATCAGGCGGCAACGTGCTGCTGCTGGATGAACCGACCAACGACCTCGACGTCGAAACCCTGCGCGCACTCGAA
GACGCGCTTGTCGATTTCGCCGGCTGCGCCGTGGTCATCTCCCACGACCGGTTCTTCCTCGACAGGATCTGCACGCATAT
TCTGGCATTTGAAGGCGAAGCCCACGTGGAATGGTTCGAAGGCGGCTTTACCGATTACGAAGAGGACAAGAAGCGCCGCT
TGGGCGCAGACGCCCTGGAGCCGAAGCGGTTGAAGCATAAGAAGTTTGTGAGGTAG

Upstream 100 bases:

>100_bases
TGCTTCTGCACCCCGCAACCGTCAATACCGGCGATTGCACCCGGACCGGCGGCGCGGTAATCGGGGGGCAAATCAGTTAT
CCAGCGACAGGAGCATCCCC

Downstream 100 bases:

>100_bases
TGAGGCGCTAGTCTAACTTATTTTTGCCAGTTCCCTAGCGTGTTTCGCACCAGGACTTGTGATAAGCACCCAAGCTACAA
AGGCTTTCTTGTCTGTGGTT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MAAYQYVYHMSGVSKTYPGGKKCFENIHLNFLPGVKIGVVGVNGAGKSTLMKIMAGLDTEFSGEAWHAEGATVGYLPQEP
KLDETLSVRENVMLAVADKKAILDRYNELAMNYSDETADEMAALQDQIDADNLWDLDSQIDVSMEALRCPPDDADVTTLS
GGEARRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGKGIPYEGNY
SDWLEQKAKRLAQEAREDKSRQKTLERELEWMRQGAKARQAKSKARINAYNEMAEQSEREKLSRAQIVIPNGQRLGSKVI
EVQGLQKAMGDKLLVEGLDFSLPPGGIVGVIGPNGAGKSTLFKMLTGQLEPDAGTIEYGDTVDLSYVDQSRDDLAENDTV
WEAISSGAELIQLGDAEVNSRAYCSSFNFKGGDQQKKVGLLSGGERNRVHMARLLKSGGNVLLLDEPTNDLDVETLRALE
DALVDFAGCAVVISHDRFFLDRICTHILAFEGEAHVEWFEGGFTDYEEDKKRRLGADALEPKRLKHKKFVR

Sequences:

>Translated_551_residues
MAAYQYVYHMSGVSKTYPGGKKCFENIHLNFLPGVKIGVVGVNGAGKSTLMKIMAGLDTEFSGEAWHAEGATVGYLPQEP
KLDETLSVRENVMLAVADKKAILDRYNELAMNYSDETADEMAALQDQIDADNLWDLDSQIDVSMEALRCPPDDADVTTLS
GGEARRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGKGIPYEGNY
SDWLEQKAKRLAQEAREDKSRQKTLERELEWMRQGAKARQAKSKARINAYNEMAEQSEREKLSRAQIVIPNGQRLGSKVI
EVQGLQKAMGDKLLVEGLDFSLPPGGIVGVIGPNGAGKSTLFKMLTGQLEPDAGTIEYGDTVDLSYVDQSRDDLAENDTV
WEAISSGAELIQLGDAEVNSRAYCSSFNFKGGDQQKKVGLLSGGERNRVHMARLLKSGGNVLLLDEPTNDLDVETLRALE
DALVDFAGCAVVISHDRFFLDRICTHILAFEGEAHVEWFEGGFTDYEEDKKRRLGADALEPKRLKHKKFVR
>Mature_550_residues
AAYQYVYHMSGVSKTYPGGKKCFENIHLNFLPGVKIGVVGVNGAGKSTLMKIMAGLDTEFSGEAWHAEGATVGYLPQEPK
LDETLSVRENVMLAVADKKAILDRYNELAMNYSDETADEMAALQDQIDADNLWDLDSQIDVSMEALRCPPDDADVTTLSG
GEARRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGKGIPYEGNYS
DWLEQKAKRLAQEAREDKSRQKTLERELEWMRQGAKARQAKSKARINAYNEMAEQSEREKLSRAQIVIPNGQRLGSKVIE
VQGLQKAMGDKLLVEGLDFSLPPGGIVGVIGPNGAGKSTLFKMLTGQLEPDAGTIEYGDTVDLSYVDQSRDDLAENDTVW
EAISSGAELIQLGDAEVNSRAYCSSFNFKGGDQQKKVGLLSGGERNRVHMARLLKSGGNVLLLDEPTNDLDVETLRALED
ALVDFAGCAVVISHDRFFLDRICTHILAFEGEAHVEWFEGGFTDYEEDKKRRLGADALEPKRLKHKKFVR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=28.5171102661597, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI69354671, Length=535, Percent_Identity=29.7196261682243, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI10947135, Length=535, Percent_Identity=29.7196261682243, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=28.3363802559415, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=28.3363802559415, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI27881501, Length=176, Percent_Identity=28.9772727272727, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI30795238, Length=176, Percent_Identity=28.9772727272727, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI9955963, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI9955970, Length=187, Percent_Identity=28.8770053475936, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=56.4195298372514, Blast_Score=651, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=511, Percent_Identity=36.2035225048924, Blast_Score=304, Evalue=1e-83,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=31.6287878787879, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=32.5141776937618, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI87081782, Length=565, Percent_Identity=24.9557522123894, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI48994943, Length=492, Percent_Identity=25.4065040650407, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788225, Length=204, Percent_Identity=30.8823529411765, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=25.9067357512953, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=26.5217391304348, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081791, Length=201, Percent_Identity=30.3482587064677, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=28.110599078341, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1790739, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48995001, Length=233, Percent_Identity=25.7510729613734, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790190, Length=202, Percent_Identity=27.7227722772277, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=25.2427184466019, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=168, Percent_Identity=27.9761904761905, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48994997, Length=215, Percent_Identity=24.6511627906977, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1786398, Length=188, Percent_Identity=29.7872340425532, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=569, Percent_Identity=27.2407732864675, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=29.6846011131725, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=25.8715596330275, Blast_Score=166, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6321121, Length=548, Percent_Identity=27.1897810218978, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=545, Percent_Identity=27.8899082568807, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6325030, Length=374, Percent_Identity=27.5401069518717, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6323278, Length=376, Percent_Identity=27.3936170212766, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=377, Percent_Identity=27.3209549071618, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320266, Length=383, Percent_Identity=25.065274151436, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24666836, Length=543, Percent_Identity=30.2025782688766, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24642252, Length=544, Percent_Identity=27.3897058823529, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI18859989, Length=544, Percent_Identity=27.3897058823529, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24641342, Length=553, Percent_Identity=30.0180831826401, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI116007184, Length=176, Percent_Identity=31.8181818181818, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221500365, Length=176, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24666092, Length=227, Percent_Identity=28.1938325991189, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61208; Mature: 61077

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYQYVYHMSGVSKTYPGGKKCFENIHLNFLPGVKIGVVGVNGAGKSTLMKIMAGLDTE
CCHHHHHHHHCCCCCCCCCHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCC
FSGEAWHAEGATVGYLPQEPKLDETLSVRENVMLAVADKKAILDRYNELAMNYSDETADE
CCCCEEECCCCEECCCCCCCCCCHHHHHHCCEEEEEECHHHHHHHHHHHHCCCCCCHHHH
MAALQDQIDADNLWDLDSQIDVSMEALRCPPDDADVTTLSGGEARRVALCKLLLEAPDML
HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEE
LLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGKGIPYEGNY
EECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCH
SDWLEQKAKRLAQEAREDKSRQKTLERELEWMRQGAKARQAKSKARINAYNEMAEQSERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSRAQIVIPNGQRLGSKVIEVQGLQKAMGDKLLVEGLDFSLPPGGIVGVIGPNGAGKST
HHHHCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCHHH
LFKMLTGQLEPDAGTIEYGDTVDLSYVDQSRDDLAENDTVWEAISSGAELIQLGDAEVNS
HHHHHHCCCCCCCCCEECCCEEEEEECCCCHHHHHCCHHHHHHHHCCCCEEEECCCCCCC
RAYCSSFNFKGGDQQKKVGLLSGGERNRVHMARLLKSGGNVLLLDEPTNDLDVETLRALE
CCEECCCCCCCCCCHHCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DALVDFAGCAVVISHDRFFLDRICTHILAFEGEAHVEWFEGGFTDYEEDKKRRLGADALE
HHHHHHHCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCC
PKRLKHKKFVR
CHHHHHHHCCC
>Mature Secondary Structure 
AAYQYVYHMSGVSKTYPGGKKCFENIHLNFLPGVKIGVVGVNGAGKSTLMKIMAGLDTE
CHHHHHHHHCCCCCCCCCHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCC
FSGEAWHAEGATVGYLPQEPKLDETLSVRENVMLAVADKKAILDRYNELAMNYSDETADE
CCCCEEECCCCEECCCCCCCCCCHHHHHHCCEEEEEECHHHHHHHHHHHHCCCCCCHHHH
MAALQDQIDADNLWDLDSQIDVSMEALRCPPDDADVTTLSGGEARRVALCKLLLEAPDML
HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEE
LLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGKGIPYEGNY
EECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCH
SDWLEQKAKRLAQEAREDKSRQKTLERELEWMRQGAKARQAKSKARINAYNEMAEQSERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSRAQIVIPNGQRLGSKVIEVQGLQKAMGDKLLVEGLDFSLPPGGIVGVIGPNGAGKST
HHHHCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCHHH
LFKMLTGQLEPDAGTIEYGDTVDLSYVDQSRDDLAENDTVWEAISSGAELIQLGDAEVNS
HHHHHHCCCCCCCCCEECCCEEEEEECCCCHHHHHCCHHHHHHHHCCCCEEEECCCCCCC
RAYCSSFNFKGGDQQKKVGLLSGGERNRVHMARLLKSGGNVLLLDEPTNDLDVETLRALE
CCEECCCCCCCCCCHHCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DALVDFAGCAVVISHDRFFLDRICTHILAFEGEAHVEWFEGGFTDYEEDKKRRLGADALE
HHHHHHHCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCC
PKRLKHKKFVR
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]