| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678560
Identifier: 110678560
GI number: 110678560
Start: 1198421
End: 1198534
Strand: Reverse
Name: 110678560
Synonym: RD1_1233
Alternate gene names: NA
Gene position: 1198534-1198421 (Counterclockwise)
Preceding gene: 110678561
Following gene: 110678559
Centisome position: 29.0
GC content: 57.02
Gene sequence:
>114_bases GTGAACAACATCACACTGCCCCCTGCGCCGGGCGACAGGCAAGCAGGCGCGCAACGCTGGGTTTCATGCGTACGGCGCTC GGTTGCAATTTTGATGAAATTCTGCTATCGTTAG
Upstream 100 bases:
>100_bases CGTGCCCGCCGAATGAACACATTGACCACTACGCCACCCTGACGCAGCCCAGTGGAAACATGGTTCCTCATCAATTAAGC ACGGGGGGTCAAAGACGTCT
Downstream 100 bases:
>100_bases CGCGCACAAAACGTCTTCTTCGACCTGCTCTCCATGAAACGGCGCTCAGACTTCGATACAGATATACTGCGCCAGGTTAT CGCACAAACGCGGATAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 37
Protein sequence:
>37_residues MNNITLPPAPGDRQAGAQRWVSCVRRSVAILMKFCYR
Sequences:
>Translated_37_residues MNNITLPPAPGDRQAGAQRWVSCVRRSVAILMKFCYR >Mature_37_residues MNNITLPPAPGDRQAGAQRWVSCVRRSVAILMKFCYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4207; Mature: 4207
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNITLPPAPGDRQAGAQRWVSCVRRSVAILMKFCYR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNITLPPAPGDRQAGAQRWVSCVRRSVAILMKFCYR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA