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The map label for this gene is 110678544

Identifier: 110678544

GI number: 110678544

Start: 1182331

End: 1183140

Strand: Direct

Name: 110678544

Synonym: RD1_1216

Alternate gene names: NA

Gene position: 1182331-1183140 (Clockwise)

Preceding gene: 110678543

Following gene: 110678547

Centisome position: 28.61

GC content: 62.1

Gene sequence:

>810_bases
ATGATCTTGCGCGGTTTGTTTTTGTTCGCACTGGCGTTCTTTGCCTTTCCGGCGGCGGCCTGTGGGCCTGACAGCGATTG
TATGATTGGTGAGCGGCACTACCGCATTGCATTGCCGCAAGGCTATGACGCCAGCGTGCCGGTGCCAGCCATCGTCTTTG
CGCATGGCTATCGTGGCTCTGCGCGGGGTGTCATGCGCAACCGGTCCCTGCGGGCACTGGCCTCTGACCTCGGGGCGGCG
CTGATTGCGGTCAAATCAGGCGATCAGGACTGGGTGATCCCGAATGCCCCGCGTCATCTTGATACAGACGGCGCGGCCGA
ATTCGCCTATTTCGACGCGGTGCTGAGCGATGCGGCAACCCGGTTTGCCATTGATAGGGACCGCATTGTCGCCACCGGGT
TCAGCGCCGGGGGCATGATGGTGTGGAACCTCGCCTGCGCGCGGCCTGACATGTTCGCGGGGTTCGTGCCGATTGCGGGA
ACCTATTGGTTGAAACCTCCGGCGACCTGTGCGGCTCCTGCGGCCAGCATCATCCACATCCACGGGGATCAGGACAAGAC
GGTGCCCTTGCTGGGCCGCCCGATTGGCCCGACCAAACAGGGCGAAGTGCCCGCAGCACTTGATATGTACGAGGCGTTTG
GCGGTTTCGGCAGCGCCAGTGCCGTGCAATATGGCGGGCTAAGCTGCAAGGAGCAGCGCAATGAGACCGGTGAACTTCTG
GCGTTCTGCCTGTTCAGGGGCGGGCATTCGTTTCGCACCGAGCATCTGCGCCATGGTTGGGAGCAATTGCAAAAGGCAGG
GCAGCTGTAA

Upstream 100 bases:

>100_bases
GTCCACATCCCGGTTATTGATGATGCGAAACGCAAAACTGTGATTTGCCAAAGGGTATCGCCACCTGTTTTGAAGGACAC
ATCATCAAGGAATGGGTTTT

Downstream 100 bases:

>100_bases
CAGCCACCCTGCACTAGGCTCAGAGCATCAGCTGGTAGCTGTGCGGCACATAGGTGAACCCGCTGTCTCTGGTTTCGACA
TACCCGACGCCGGGCCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phospholipase/Carboxylesterase Family Protein; Esterase/Lipase/Thioesterase; Phospholipase/Carboxylesterase; PHB Depolymerase; Phospholipase/Carboxylesterase Superfamily; Lipoprotein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MILRGLFLFALAFFAFPAAACGPDSDCMIGERHYRIALPQGYDASVPVPAIVFAHGYRGSARGVMRNRSLRALASDLGAA
LIAVKSGDQDWVIPNAPRHLDTDGAAEFAYFDAVLSDAATRFAIDRDRIVATGFSAGGMMVWNLACARPDMFAGFVPIAG
TYWLKPPATCAAPAASIIHIHGDQDKTVPLLGRPIGPTKQGEVPAALDMYEAFGGFGSASAVQYGGLSCKEQRNETGELL
AFCLFRGGHSFRTEHLRHGWEQLQKAGQL

Sequences:

>Translated_269_residues
MILRGLFLFALAFFAFPAAACGPDSDCMIGERHYRIALPQGYDASVPVPAIVFAHGYRGSARGVMRNRSLRALASDLGAA
LIAVKSGDQDWVIPNAPRHLDTDGAAEFAYFDAVLSDAATRFAIDRDRIVATGFSAGGMMVWNLACARPDMFAGFVPIAG
TYWLKPPATCAAPAASIIHIHGDQDKTVPLLGRPIGPTKQGEVPAALDMYEAFGGFGSASAVQYGGLSCKEQRNETGELL
AFCLFRGGHSFRTEHLRHGWEQLQKAGQL
>Mature_269_residues
MILRGLFLFALAFFAFPAAACGPDSDCMIGERHYRIALPQGYDASVPVPAIVFAHGYRGSARGVMRNRSLRALASDLGAA
LIAVKSGDQDWVIPNAPRHLDTDGAAEFAYFDAVLSDAATRFAIDRDRIVATGFSAGGMMVWNLACARPDMFAGFVPIAG
TYWLKPPATCAAPAASIIHIHGDQDKTVPLLGRPIGPTKQGEVPAALDMYEAFGGFGSASAVQYGGLSCKEQRNETGELL
AFCLFRGGHSFRTEHLRHGWEQLQKAGQL

Specific function: Unknown

COG id: COG3509

COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28833; Mature: 28833

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRGLFLFALAFFAFPAAACGPDSDCMIGERHYRIALPQGYDASVPVPAIVFAHGYRGS
CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCEEEEECCCCCC
ARGVMRNRSLRALASDLGAALIAVKSGDQDWVIPNAPRHLDTDGAAEFAYFDAVLSDAAT
CCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RFAIDRDRIVATGFSAGGMMVWNLACARPDMFAGFVPIAGTYWLKPPATCAAPAASIIHI
HHCCCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCCCCCEEEECCCCCHHCCCEEEEEE
HGDQDKTVPLLGRPIGPTKQGEVPAALDMYEAFGGFGSASAVQYGGLSCKEQRNETGELL
ECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHH
AFCLFRGGHSFRTEHLRHGWEQLQKAGQL
HHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILRGLFLFALAFFAFPAAACGPDSDCMIGERHYRIALPQGYDASVPVPAIVFAHGYRGS
CCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCEEEEECCCCCC
ARGVMRNRSLRALASDLGAALIAVKSGDQDWVIPNAPRHLDTDGAAEFAYFDAVLSDAAT
CCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RFAIDRDRIVATGFSAGGMMVWNLACARPDMFAGFVPIAGTYWLKPPATCAAPAASIIHI
HHCCCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCCCCCEEEECCCCCHHCCCEEEEEE
HGDQDKTVPLLGRPIGPTKQGEVPAALDMYEAFGGFGSASAVQYGGLSCKEQRNETGELL
ECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHH
AFCLFRGGHSFRTEHLRHGWEQLQKAGQL
HHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA