| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678523
Identifier: 110678523
GI number: 110678523
Start: 1158729
End: 1159412
Strand: Reverse
Name: 110678523
Synonym: RD1_1194
Alternate gene names: NA
Gene position: 1159412-1158729 (Counterclockwise)
Preceding gene: 110678524
Following gene: 110678522
Centisome position: 28.05
GC content: 59.5
Gene sequence:
>684_bases ATGACGTATGATCTTTTTATTGGCGATCGGACTTTTTCAAGCTGGTCATTGCGCGGCTGGTTGATGCTGGAAAAATTCGG CCTTGCACATCGCACCCATATGGTCGGGCTTTATGCAGGCACAATGGCGCAAGACATTGCACAATTGGCACCTGCGCGAC TGGTGCCCGTTCTGAGAACACCCGAGGGCAATGTCGTGGGCGAAAGCCTCGCCATGGCCGAAACACTGGCCGAACGGCAC CCCGACGCCGGGCTTTGGCCGCGCGAGCCAAGTGCAAGGATGCGCGCCCGCTGGCTTTGCGCTGAAATGGCCTCCGGCTT TTCCGCGCTGCGCTCGCAATGCCCGATGCAGTTGCAGCATGTGAACACGGGTTTCGTTGCAAAGGACGCCGTGCTGAGCG ATCTGGAACGCCTGCAAGAGCTGTGGCAGGGCGCGTTCAAGATGACCGGCCACGCAGACGGCTGGCTGTTTGATACATAT TCGCTGGCGGATGTTTTCTTTGCCCCCGTCGCGGCGCGCATCATCGGCTATGACCTTCCGGTATCGCAACAGGCGCTGGA CTATTGCATGCGCACCCTGCGTGATCCGGCTTTTCGCGCCTGGCGGTCGGACGGGCTTAAAATCACCTATGATCCATTTC CCTACCCCGCGGGCACCGGCACAAAACCCTGGCCCGTAAGCTAA
Upstream 100 bases:
>100_bases GCGACACGGACCCGGTGCCCTACATCAATCATTTACCGTGATCCCCTGCCGCACAAAATAGAATTGGCATAACCTTACCC GGTGGCCGTAGCCTGATGCC
Downstream 100 bases:
>100_bases AAACACGACGAGCCTTTAACCTTTCGTAAACACACCTGACGTAGCCGTTAACCATAACACGCCAACCTCGGGGATATCTG TGTCGCTTACCTATTCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTYDLFIGDRTFSSWSLRGWLMLEKFGLAHRTHMVGLYAGTMAQDIAQLAPARLVPVLRTPEGNVVGESLAMAETLAERH PDAGLWPREPSARMRARWLCAEMASGFSALRSQCPMQLQHVNTGFVAKDAVLSDLERLQELWQGAFKMTGHADGWLFDTY SLADVFFAPVAARIIGYDLPVSQQALDYCMRTLRDPAFRAWRSDGLKITYDPFPYPAGTGTKPWPVS
Sequences:
>Translated_227_residues MTYDLFIGDRTFSSWSLRGWLMLEKFGLAHRTHMVGLYAGTMAQDIAQLAPARLVPVLRTPEGNVVGESLAMAETLAERH PDAGLWPREPSARMRARWLCAEMASGFSALRSQCPMQLQHVNTGFVAKDAVLSDLERLQELWQGAFKMTGHADGWLFDTY SLADVFFAPVAARIIGYDLPVSQQALDYCMRTLRDPAFRAWRSDGLKITYDPFPYPAGTGTKPWPVS >Mature_226_residues TYDLFIGDRTFSSWSLRGWLMLEKFGLAHRTHMVGLYAGTMAQDIAQLAPARLVPVLRTPEGNVVGESLAMAETLAERHP DAGLWPREPSARMRARWLCAEMASGFSALRSQCPMQLQHVNTGFVAKDAVLSDLERLQELWQGAFKMTGHADGWLFDTYS LADVFFAPVAARIIGYDLPVSQQALDYCMRTLRDPAFRAWRSDGLKITYDPFPYPAGTGTKPWPVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25403; Mature: 25272
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDLFIGDRTFSSWSLRGWLMLEKFGLAHRTHMVGLYAGTMAQDIAQLAPARLVPVLRT CEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEC PEGNVVGESLAMAETLAERHPDAGLWPREPSARMRARWLCAEMASGFSALRSQCPMQLQH CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH VNTGFVAKDAVLSDLERLQELWQGAFKMTGHADGWLFDTYSLADVFFAPVAARIIGYDLP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC VSQQALDYCMRTLRDPAFRAWRSDGLKITYDPFPYPAGTGTKPWPVS CCHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TYDLFIGDRTFSSWSLRGWLMLEKFGLAHRTHMVGLYAGTMAQDIAQLAPARLVPVLRT EEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEC PEGNVVGESLAMAETLAERHPDAGLWPREPSARMRARWLCAEMASGFSALRSQCPMQLQH CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH VNTGFVAKDAVLSDLERLQELWQGAFKMTGHADGWLFDTYSLADVFFAPVAARIIGYDLP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC VSQQALDYCMRTLRDPAFRAWRSDGLKITYDPFPYPAGTGTKPWPVS CCHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA