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The map label for this gene is comM [H]

Identifier: 110678522

GI number: 110678522

Start: 1157150

End: 1158649

Strand: Reverse

Name: comM [H]

Synonym: RD1_1193

Alternate gene names: 110678522

Gene position: 1158649-1157150 (Counterclockwise)

Preceding gene: 110678523

Following gene: 110678518

Centisome position: 28.03

GC content: 61.33

Gene sequence:

>1500_bases
GTGTCGCTTACCTATTCAGTTGCTTTTCGCGGCGTCGAAGCCTGCCCCGTCGAAGTTCAATGTGCGCTGGCGCCGGGTCT
GCCGGGTTTCAGCATCGTGGGGCTGCCGGACAAGGCGGTCTCAGAAGCCAAGGAACGTGTGCGCGCGGCGCTGGCGAGCA
TGGCCATCGCCTTCCCTTCCAAAAAGGTCACCATTAACCTCAGCCCTGCCGATCTGCCGAAGGAAGGTGGGCATTTCGAT
CTGCCCATCGCCCTGGCGCTTTTGGCGGAGTTGAGCATCATTCCCCATGACGTGATCCTGTCCGTCGTCTCTTTGGGCGA
GCTGTCACTGGACGGCAAACTGGTGCCGGTCACGGGTGCTTTGCCCGCGGCGATGACCGCCGCCGAGGAGGAAAACATCC
TGCTTTGCCCTGCCGAGTGCGGCAAAGAAGCGGCTTGGGTCAGTGGTGCGCGGGTCATCGCCGCCAGATCACTGGGCGAT
GTTGTGCGCCATTTTACCGGGCAGAACCTGATCACGGATTCCCACCCCGGCGAAGTGATCACACCGGAAAAGACGCTCGA
GTTGCGCGACGTGCGCGGTCAGGAACGTGCAAAACGCGCGCTGGAAATCGCTGCCGCCGGGCGACATCATATGCTGATGG
TTGGCCCGCCGGGATCGGGAAAATCCATGCTGTCGCGGCGTTTACCCGGTATTTTGCCCCCGCTGAGCGCACAGGAAGCG
CTGGAAACCTCCATTATCCATTCGATTGCCGGCTTGTTGGACGAGGGCGGTATTTCGCGTCAACGCCCGTTTCGCGATCC
GCATCACACCTCATCAACGGCGGCGATCATCGGTGGCGGACGCCTTGCGAAACCGGGCGAGGTGTCACTGGCACACAACG
GGGTTTTATTCATGGATGAATTGCCCGAATTCCCGCGCAATGTGCTCGAAACCCTGCGCCAGCCGCTTGAGACCGGCAAC
ATCATGGTATCACGCGCCAATGCGCATGTGAAATACCCCTGCAAATTCATGCTGATCGCTGCGGCAAACCCGTGCAAATG
CGGCTATATGACAGATGCCGAACGCGCCTGCGCCCGTGTGCCGACCTGCGGCGAGGACTACATGGGGCGCATATCTGGAC
CCTTGCTCGACCGGTTTGATCTGCGCGTTGATGTGCCGCCTGTAAGCTATGAAGACCTCGATTTGCCCGCCAATGGCGAT
ACTTCCGAGACGGTCGCCCAGCGGGTGGCGGGCGCATGTGAACGACAGTCCGCGCGTTTTGCGACCCATGACGGCATCCG
CTCCAACGCGGATATCGAGGGCGAAGCGCTGGAAGAAATCGCAGCGCCGGATGCGGAAGGACGCGATCTGTTGCTGCGCG
CTGCCGAGAAGTTCCGGATGTCCGCGCGCGGGTATCACCGGGTCATGCGGGTGGCGCGCACGATTGCCGATCTCGATCAT
TCGGAAGGCGTGCGCAAGCCACATGTGGCTGAGGCGATCAGCTACCGCATCAATGCCTAG

Upstream 100 bases:

>100_bases
AAACCCTGGCCCGTAAGCTAAAAACACGACGAGCCTTTAACCTTTCGTAAACACACCTGACGTAGCCGTTAACCATAACA
CGCCAACCTCGGGGATATCT

Downstream 100 bases:

>100_bases
AGGGTCAGCGCGCCGCTGCCCTGTCTTCAATGGCCTGCCAGATGTGTGCCGCGATGTTCACCTGATCAAATCGTTCAAGT
TCCTGAATGCCCGTGGGGGA

Product: Mg chelatase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSLTYSVAFRGVEACPVEVQCALAPGLPGFSIVGLPDKAVSEAKERVRAALASMAIAFPSKKVTINLSPADLPKEGGHFD
LPIALALLAELSIIPHDVILSVVSLGELSLDGKLVPVTGALPAAMTAAEEENILLCPAECGKEAAWVSGARVIAARSLGD
VVRHFTGQNLITDSHPGEVITPEKTLELRDVRGQERAKRALEIAAAGRHHMLMVGPPGSGKSMLSRRLPGILPPLSAQEA
LETSIIHSIAGLLDEGGISRQRPFRDPHHTSSTAAIIGGGRLAKPGEVSLAHNGVLFMDELPEFPRNVLETLRQPLETGN
IMVSRANAHVKYPCKFMLIAAANPCKCGYMTDAERACARVPTCGEDYMGRISGPLLDRFDLRVDVPPVSYEDLDLPANGD
TSETVAQRVAGACERQSARFATHDGIRSNADIEGEALEEIAAPDAEGRDLLLRAAEKFRMSARGYHRVMRVARTIADLDH
SEGVRKPHVAEAISYRINA

Sequences:

>Translated_499_residues
MSLTYSVAFRGVEACPVEVQCALAPGLPGFSIVGLPDKAVSEAKERVRAALASMAIAFPSKKVTINLSPADLPKEGGHFD
LPIALALLAELSIIPHDVILSVVSLGELSLDGKLVPVTGALPAAMTAAEEENILLCPAECGKEAAWVSGARVIAARSLGD
VVRHFTGQNLITDSHPGEVITPEKTLELRDVRGQERAKRALEIAAAGRHHMLMVGPPGSGKSMLSRRLPGILPPLSAQEA
LETSIIHSIAGLLDEGGISRQRPFRDPHHTSSTAAIIGGGRLAKPGEVSLAHNGVLFMDELPEFPRNVLETLRQPLETGN
IMVSRANAHVKYPCKFMLIAAANPCKCGYMTDAERACARVPTCGEDYMGRISGPLLDRFDLRVDVPPVSYEDLDLPANGD
TSETVAQRVAGACERQSARFATHDGIRSNADIEGEALEEIAAPDAEGRDLLLRAAEKFRMSARGYHRVMRVARTIADLDH
SEGVRKPHVAEAISYRINA
>Mature_498_residues
SLTYSVAFRGVEACPVEVQCALAPGLPGFSIVGLPDKAVSEAKERVRAALASMAIAFPSKKVTINLSPADLPKEGGHFDL
PIALALLAELSIIPHDVILSVVSLGELSLDGKLVPVTGALPAAMTAAEEENILLCPAECGKEAAWVSGARVIAARSLGDV
VRHFTGQNLITDSHPGEVITPEKTLELRDVRGQERAKRALEIAAAGRHHMLMVGPPGSGKSMLSRRLPGILPPLSAQEAL
ETSIIHSIAGLLDEGGISRQRPFRDPHHTSSTAAIIGGGRLAKPGEVSLAHNGVLFMDELPEFPRNVLETLRQPLETGNI
MVSRANAHVKYPCKFMLIAAANPCKCGYMTDAERACARVPTCGEDYMGRISGPLLDRFDLRVDVPPVSYEDLDLPANGDT
SETVAQRVAGACERQSARFATHDGIRSNADIEGEALEEIAAPDAEGRDLLLRAAEKFRMSARGYHRVMRVARTIADLDHS
EGVRKPHVAEAISYRINA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=499, Percent_Identity=40.6813627254509, Blast_Score=373, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53365; Mature: 53234

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTYSVAFRGVEACPVEVQCALAPGLPGFSIVGLPDKAVSEAKERVRAALASMAIAFPS
CCEEEEEHHCCCCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
KKVTINLSPADLPKEGGHFDLPIALALLAELSIIPHDVILSVVSLGELSLDGKLVPVTGA
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCC
LPAAMTAAEEENILLCPAECGKEAAWVSGARVIAARSLGDVVRHFTGQNLITDSHPGEVI
CHHHHHHCCCCCEEEECHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
TPEKTLELRDVRGQERAKRALEIAAAGRHHMLMVGPPGSGKSMLSRRLPGILPPLSAQEA
CCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHHH
LETSIIHSIAGLLDEGGISRQRPFRDPHHTSSTAAIIGGGRLAKPGEVSLAHNGVLFMDE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEHHH
LPEFPRNVLETLRQPLETGNIMVSRANAHVKYPCKFMLIAAANPCKCGYMTDAERACARV
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEECCEEEEEEECCCCCCCCCCCCHHHHHHCC
PTCGEDYMGRISGPLLDRFDLRVDVPPVSYEDLDLPANGDTSETVAQRVAGACERQSARF
CCCCHHHHHHHCCCCHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
ATHDGIRSNADIEGEALEEIAAPDAEGRDLLLRAAEKFRMSARGYHRVMRVARTIADLDH
HHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
SEGVRKPHVAEAISYRINA
CCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SLTYSVAFRGVEACPVEVQCALAPGLPGFSIVGLPDKAVSEAKERVRAALASMAIAFPS
CEEEEEHHCCCCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
KKVTINLSPADLPKEGGHFDLPIALALLAELSIIPHDVILSVVSLGELSLDGKLVPVTGA
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCC
LPAAMTAAEEENILLCPAECGKEAAWVSGARVIAARSLGDVVRHFTGQNLITDSHPGEVI
CHHHHHHCCCCCEEEECHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
TPEKTLELRDVRGQERAKRALEIAAAGRHHMLMVGPPGSGKSMLSRRLPGILPPLSAQEA
CCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHHH
LETSIIHSIAGLLDEGGISRQRPFRDPHHTSSTAAIIGGGRLAKPGEVSLAHNGVLFMDE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEHHH
LPEFPRNVLETLRQPLETGNIMVSRANAHVKYPCKFMLIAAANPCKCGYMTDAERACARV
CCHHHHHHHHHHHHHHHCCCEEEEECCCCEECCEEEEEEECCCCCCCCCCCCHHHHHHCC
PTCGEDYMGRISGPLLDRFDLRVDVPPVSYEDLDLPANGDTSETVAQRVAGACERQSARF
CCCCHHHHHHHCCCCHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
ATHDGIRSNADIEGEALEEIAAPDAEGRDLLLRAAEKFRMSARGYHRVMRVARTIADLDH
HHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
SEGVRKPHVAEAISYRINA
CCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]