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The map label for this gene is yqjC [H]

Identifier: 110678509

GI number: 110678509

Start: 1144232

End: 1144636

Strand: Direct

Name: yqjC [H]

Synonym: RD1_1179

Alternate gene names: 110678509

Gene position: 1144232-1144636 (Clockwise)

Preceding gene: 110678507

Following gene: 110678510

Centisome position: 27.68

GC content: 56.54

Gene sequence:

>405_bases
ATGATCGGCCGCCTGAACCATGTTGCGATTGCAGTGCCAGACCTTGAAGCTGCAGCAAATCAATACCGCACAGCCTTGGG
GGCCAATGTCGGCGCACCGCAGGATGAGCCGGACCACGGCGTGACGGTGATCTTCATTGAATTGCCCAATACGAAAATCG
AACTGCTTTATCCGTTGGGAGAGGCAAGCCCGATCCAGGGCTTCCTTGATAAAAACCCCGCAGGGGGCATTCACCATGTC
TGCTACGAAGTCGAGGATATCCTAGCAGCACGCGACCACCTTGTTGAAACCGGCGCGCGTGTCCTTGGCAGCGGAGAGCC
CAAGATCGGGGCACATGGCAAACCGGTTCTGTTCCTGCATCCCAAAGACTTCAACGGGTGCCTCGTGGAACTGGAACAAA
CCTGA

Upstream 100 bases:

>100_bases
GCGGCTGGTGGCTGTGGGCCTGCCTGCGTCGCTCTTGCACTTGCACTGGATCGAGCACAGTTCCATAACCAGCCAAACGA
TTATCAACAGGGGAAAACCA

Downstream 100 bases:

>100_bases
GCTTTTGATTGGAGGCCTGAATATGGGTGTTACGTCTGCCTTGGTACTATTTGCGGTGATCTGGTCCCTCATGTTCCTGA
TCATCCTGCCCATCCGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIGRLNHVAIAVPDLEAAANQYRTALGANVGAPQDEPDHGVTVIFIELPNTKIELLYPLGEASPIQGFLDKNPAGGIHHV
CYEVEDILAARDHLVETGARVLGSGEPKIGAHGKPVLFLHPKDFNGCLVELEQT

Sequences:

>Translated_134_residues
MIGRLNHVAIAVPDLEAAANQYRTALGANVGAPQDEPDHGVTVIFIELPNTKIELLYPLGEASPIQGFLDKNPAGGIHHV
CYEVEDILAARDHLVETGARVLGSGEPKIGAHGKPVLFLHPKDFNGCLVELEQT
>Mature_134_residues
MIGRLNHVAIAVPDLEAAANQYRTALGANVGAPQDEPDHGVTVIFIELPNTKIELLYPLGEASPIQGFLDKNPAGGIHHV
CYEVEDILAARDHLVETGARVLGSGEPKIGAHGKPVLFLHPKDFNGCLVELEQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=133, Percent_Identity=62.406015037594, Blast_Score=158, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17506387, Length=133, Percent_Identity=57.1428571428571, Blast_Score=155, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14334; Mature: 14334

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRLNHVAIAVPDLEAAANQYRTALGANVGAPQDEPDHGVTVIFIELPNTKIELLYPLG
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
EASPIQGFLDKNPAGGIHHVCYEVEDILAARDHLVETGARVLGSGEPKIGAHGKPVLFLH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PKDFNGCLVELEQT
CCCCCCEEEEEECC
>Mature Secondary Structure
MIGRLNHVAIAVPDLEAAANQYRTALGANVGAPQDEPDHGVTVIFIELPNTKIELLYPLG
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
EASPIQGFLDKNPAGGIHHVCYEVEDILAARDHLVETGARVLGSGEPKIGAHGKPVLFLH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PKDFNGCLVELEQT
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]