| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678507
Identifier: 110678507
GI number: 110678507
Start: 1142552
End: 1143274
Strand: Direct
Name: 110678507
Synonym: RD1_1177
Alternate gene names: NA
Gene position: 1142552-1143274 (Clockwise)
Preceding gene: 110678506
Following gene: 110678509
Centisome position: 27.64
GC content: 56.98
Gene sequence:
>723_bases ATGCCGCGCAGTACCAGTCAATCGCCGGTTCTCGGTATGCCTGTGCCGAATTGGTCAGTGCCCGATGCGCCCCAAGGCAT ATCGCTTATCGGGCGCTATGCCGAATTGCACCTGCTCGATGCTGATCTGCACGGTGCGGCGCTGTTTGATGCCTATAGCG GCCATGACCAGATCTGGGATTATCTGCCCTATGGGCCCTTCGAGACAGCCACCGAATTCAAGACGTGGGTCAAGCGGACG ATCTCTGCGCCGATCCATCAGTTCTATGCGATCAAAAACAAGGAGAGCGGTGTTTTCGAAGGTGTCGCCAGTTATCTGCG CATTGATCCGGCGAATGGCTCAATCGAAGTCGGGCACATAAATTACAGCCCCGCGCTGCAGCGGACGCGCGCAGGCACTG AGGCCATGTATCTCATGATGCAGAATGCCTTTGGTATCGGCTTTCGTCGCTATGAATGGAAATGCAACGCGCTGAACTTG GGGTCGCGTCGGGCGGCGCAACGGCTCGGGTTCAGCTATGAAGGTGTGTTTCGGCAAGCCACCGTGAGCAAGGGACGCAA CCGGGATACCGCATGGTTTGCGATCATTGATCAGGAATGGCCCGCGCTACGGCGTGCGTTTGAGACATGGTTGGCCCCTG AAAACTTCGAACAGGGCAGGCAGTTGACCAGCCTTGGTGATTTGACCCGCACGGTCAGGGTCACCAGTGATCCACTGTTG TAA
Upstream 100 bases:
>100_bases CCGTCTGAACCGGAAAGCGAACAGCTGATGGAGCTGGGCTTGCGGGTCATTCCCAAGGACTGACCCCATAACGCCCCGAC TTTTAACGGGAGGCTTGCAG
Downstream 100 bases:
>100_bases GTAATCCCGCCCTCAGATTGCCAGCTTCCGGGTGAGTCGTTGTTGCACCAGTGAAGCCAGTCTTGACACCTCATTTTGTG CAGATGCGCCGGAGGCACGC
Product: acetyltransferase, putative
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Ribosomal Protein Serine Acetyltransferase; Amino-Acid Acetyltransferase; Ribosomal-Protein-Serine Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Ypothetical Protein SMU.; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPRSTSQSPVLGMPVPNWSVPDAPQGISLIGRYAELHLLDADLHGAALFDAYSGHDQIWDYLPYGPFETATEFKTWVKRT ISAPIHQFYAIKNKESGVFEGVASYLRIDPANGSIEVGHINYSPALQRTRAGTEAMYLMMQNAFGIGFRRYEWKCNALNL GSRRAAQRLGFSYEGVFRQATVSKGRNRDTAWFAIIDQEWPALRRAFETWLAPENFEQGRQLTSLGDLTRTVRVTSDPLL
Sequences:
>Translated_240_residues MPRSTSQSPVLGMPVPNWSVPDAPQGISLIGRYAELHLLDADLHGAALFDAYSGHDQIWDYLPYGPFETATEFKTWVKRT ISAPIHQFYAIKNKESGVFEGVASYLRIDPANGSIEVGHINYSPALQRTRAGTEAMYLMMQNAFGIGFRRYEWKCNALNL GSRRAAQRLGFSYEGVFRQATVSKGRNRDTAWFAIIDQEWPALRRAFETWLAPENFEQGRQLTSLGDLTRTVRVTSDPLL >Mature_239_residues PRSTSQSPVLGMPVPNWSVPDAPQGISLIGRYAELHLLDADLHGAALFDAYSGHDQIWDYLPYGPFETATEFKTWVKRTI SAPIHQFYAIKNKESGVFEGVASYLRIDPANGSIEVGHINYSPALQRTRAGTEAMYLMMQNAFGIGFRRYEWKCNALNLG SRRAAQRLGFSYEGVFRQATVSKGRNRDTAWFAIIDQEWPALRRAFETWLAPENFEQGRQLTSLGDLTRTVRVTSDPLL
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322233, Length=213, Percent_Identity=47.4178403755869, Blast_Score=201, Evalue=9e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27065; Mature: 26934
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSTSQSPVLGMPVPNWSVPDAPQGISLIGRYAELHLLDADLHGAALFDAYSGHDQIWD CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHH YLPYGPFETATEFKTWVKRTISAPIHQFYAIKNKESGVFEGVASYLRIDPANGSIEVGHI CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHEECCCCCCEEEEEE NYSPALQRTRAGTEAMYLMMQNAFGIGFRRYEWKCNALNLGSRRAAQRLGFSYEGVFRQA CCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHH TVSKGRNRDTAWFAIIDQEWPALRRAFETWLAPENFEQGRQLTSLGDLTRTVRVTSDPLL HHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure PRSTSQSPVLGMPVPNWSVPDAPQGISLIGRYAELHLLDADLHGAALFDAYSGHDQIWD CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHH YLPYGPFETATEFKTWVKRTISAPIHQFYAIKNKESGVFEGVASYLRIDPANGSIEVGHI CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHEECCCCCCEEEEEE NYSPALQRTRAGTEAMYLMMQNAFGIGFRRYEWKCNALNLGSRRAAQRLGFSYEGVFRQA CCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHH TVSKGRNRDTAWFAIIDQEWPALRRAFETWLAPENFEQGRQLTSLGDLTRTVRVTSDPLL HHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA