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The map label for this gene is pqqE [H]

Identifier: 110678480

GI number: 110678480

Start: 1112322

End: 1113428

Strand: Reverse

Name: pqqE [H]

Synonym: RD1_1150

Alternate gene names: 110678480

Gene position: 1113428-1112322 (Counterclockwise)

Preceding gene: 110678481

Following gene: 110678479

Centisome position: 26.94

GC content: 61.43

Gene sequence:

>1107_bases
ATGAAACCACCCGCCCCGATTGCGATGCTGGCGGAGTTGACGCACCGCTGCCCCCTGTCCTGCCCCTATTGTTCAAACCC
TGTCGAGTTGACCCGGCAAAACGCAGAACTCGATACGCAAACATGGGCGCGTGTTTTTCGCGAAGCGGCGGATCTGGGCG
TATTGCAATTGCACCTGTCGGGGGGAGAGCCTGCGTCGCGCCGGGATCTGACCGAGCTTGTGATCGCAGCGCGCGAAGCC
GGGCTTTATACAAACCTGATCACCTCGGGCATCGGGCTGACGCAAAAGCGCCTCGGTGAACTGGATGCGGCGGGGCTTGA
TCATGTTCAACTGTCGCTGCAGGGGACGAACCCTGAAATGGCTGACGAGATTGGCGGCTATAACGGCGGCTTCAAACGCA
AGATGCAGGTTGCCGAATGGCTCGGCGAGATCGGCTTTCCGCTGACGCTCAACGCTGTTCTGCACCGGCGAAACCTGCAC
CAGCTGCCCCGCGCGCTCGAGATGGCGCAGGAAATGGGCGCACGCCGGATCGAAGTCGCCACTGTCCAGTTTCATGGCTG
GGCGCTCAAGAACCGCGACGCCTTGATGCCCACGCGCGCGCAGGCGCAGGAAGCAAACCGCATCGTGGCAGAAGCCCGCA
AGCAACTGAAAGGCACATTGGTCATCGACTATGTGCCCGCCGATTATCACGAAGACTATCCCAAACGCTGCATGGGCGGA
TGGGGGACATCCGGTTTCAACGTGATCCCTGATGGGCAGGTTCTGCCCTGTCATGCGGCGCAATCCATCCCGCATCTCAG
CTTTGATCGTGTGCAGGACAAGTCGCTTGCTGACATCTGGTACAACGGAGAGGCGTTCAACGCCTATCGTGGCACCGAGT
GGATGGCGGAACCCTGCCAAAGTTGCGAGCGCAAGACCATAGACTTCGGAGGCTGCCGGTGTCAGGCTCTGGCCATCGTC
GGCGATGCATCCGCGACCGATCCCGTTTGCATCAAATCGCCCCATCACGGCGCGTTGCAGGCGCAGGCGGACACCCACGC
AGCGCAAGTCGACGCCCCCCTCGTCTATCGGGCATTCCCCGGCAAGGAAACGGAGCCTGCCGAGTAG

Upstream 100 bases:

>100_bases
TGTTGGCAGACCGCTATGACGCCCCGCAAGACCAGATTCAAAAAGACAGTGCCGGTTTTCTGGATGCCTTGCGCAGCCGT
CGGTTTCTGGATGTGTCTGA

Downstream 100 bases:

>100_bases
GACAAGCCCGCCCCACGGAAATGAGGCTTGATGAACGAGGGGCGCGCTGTTAGCGCTGTTGGCATGGATAAGGTCATCGT
CTGCATCAACTGGGGCACCA

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKPPAPIAMLAELTHRCPLSCPYCSNPVELTRQNAELDTQTWARVFREAADLGVLQLHLSGGEPASRRDLTELVIAAREA
GLYTNLITSGIGLTQKRLGELDAAGLDHVQLSLQGTNPEMADEIGGYNGGFKRKMQVAEWLGEIGFPLTLNAVLHRRNLH
QLPRALEMAQEMGARRIEVATVQFHGWALKNRDALMPTRAQAQEANRIVAEARKQLKGTLVIDYVPADYHEDYPKRCMGG
WGTSGFNVIPDGQVLPCHAAQSIPHLSFDRVQDKSLADIWYNGEAFNAYRGTEWMAEPCQSCERKTIDFGGCRCQALAIV
GDASATDPVCIKSPHHGALQAQADTHAAQVDAPLVYRAFPGKETEPAE

Sequences:

>Translated_368_residues
MKPPAPIAMLAELTHRCPLSCPYCSNPVELTRQNAELDTQTWARVFREAADLGVLQLHLSGGEPASRRDLTELVIAAREA
GLYTNLITSGIGLTQKRLGELDAAGLDHVQLSLQGTNPEMADEIGGYNGGFKRKMQVAEWLGEIGFPLTLNAVLHRRNLH
QLPRALEMAQEMGARRIEVATVQFHGWALKNRDALMPTRAQAQEANRIVAEARKQLKGTLVIDYVPADYHEDYPKRCMGG
WGTSGFNVIPDGQVLPCHAAQSIPHLSFDRVQDKSLADIWYNGEAFNAYRGTEWMAEPCQSCERKTIDFGGCRCQALAIV
GDASATDPVCIKSPHHGALQAQADTHAAQVDAPLVYRAFPGKETEPAE
>Mature_368_residues
MKPPAPIAMLAELTHRCPLSCPYCSNPVELTRQNAELDTQTWARVFREAADLGVLQLHLSGGEPASRRDLTELVIAAREA
GLYTNLITSGIGLTQKRLGELDAAGLDHVQLSLQGTNPEMADEIGGYNGGFKRKMQVAEWLGEIGFPLTLNAVLHRRNLH
QLPRALEMAQEMGARRIEVATVQFHGWALKNRDALMPTRAQAQEANRIVAEARKQLKGTLVIDYVPADYHEDYPKRCMGG
WGTSGFNVIPDGQVLPCHAAQSIPHLSFDRVQDKSLADIWYNGEAFNAYRGTEWMAEPCQSCERKTIDFGGCRCQALAIV
GDASATDPVCIKSPHHGALQAQADTHAAQVDAPLVYRAFPGKETEPAE

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40373; Mature: 40373

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPAPIAMLAELTHRCPLSCPYCSNPVELTRQNAELDTQTWARVFREAADLGVLQLHLS
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEC
GGEPASRRDLTELVIAAREAGLYTNLITSGIGLTQKRLGELDAAGLDHVQLSLQGTNPEM
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCHH
ADEIGGYNGGFKRKMQVAEWLGEIGFPLTLNAVLHRRNLHQLPRALEMAQEMGARRIEVA
HHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TVQFHGWALKNRDALMPTRAQAQEANRIVAEARKQLKGTLVIDYVPADYHEDYPKRCMGG
EEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCC
WGTSGFNVIPDGQVLPCHAAQSIPHLSFDRVQDKSLADIWYNGEAFNAYRGTEWMAEPCQ
CCCCCCCCCCCCCEECCHHHHCCCCCCHHHHCCCCHHHEEECCCEECCCCCCHHHHHHHH
SCERKTIDFGGCRCQALAIVGDASATDPVCIKSPHHGALQAQADTHAAQVDAPLVYRAFP
HHHHCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCEEECCCCHHHHCCCCEEEEECC
GKETEPAE
CCCCCCCC
>Mature Secondary Structure
MKPPAPIAMLAELTHRCPLSCPYCSNPVELTRQNAELDTQTWARVFREAADLGVLQLHLS
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEC
GGEPASRRDLTELVIAAREAGLYTNLITSGIGLTQKRLGELDAAGLDHVQLSLQGTNPEM
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCHH
ADEIGGYNGGFKRKMQVAEWLGEIGFPLTLNAVLHRRNLHQLPRALEMAQEMGARRIEVA
HHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TVQFHGWALKNRDALMPTRAQAQEANRIVAEARKQLKGTLVIDYVPADYHEDYPKRCMGG
EEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCC
WGTSGFNVIPDGQVLPCHAAQSIPHLSFDRVQDKSLADIWYNGEAFNAYRGTEWMAEPCQ
CCCCCCCCCCCCCEECCHHHHCCCCCCHHHHCCCCHHHEEECCCEECCCCCCHHHHHHHH
SCERKTIDFGGCRCQALAIVGDASATDPVCIKSPHHGALQAQADTHAAQVDAPLVYRAFP
HHHHCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCEEECCCCHHHHCCCCEEEEECC
GKETEPAE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA