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The map label for this gene is pqqD [H]

Identifier: 110678481

GI number: 110678481

Start: 1113425

End: 1113700

Strand: Reverse

Name: pqqD [H]

Synonym: RD1_1151

Alternate gene names: 110678481

Gene position: 1113700-1113425 (Counterclockwise)

Preceding gene: 110678482

Following gene: 110678480

Centisome position: 26.95

GC content: 58.7

Gene sequence:

>276_bases
ATGCTGAGCACTGATATTCCTTGCCTGCCGCGTGGCGTGCGCCTGCACCATGATCGTATACGCAATGCATGGGTTCTCCT
CGCGCCGGAACGCGCCATCACTCTGGACGCGGTCGGCCATGCAATCCTGAACGAGGTGGATGGCGCGCGCAGTTTCGGCG
AAATCACCAGCGTGTTGGCAGACCGCTATGACGCCCCGCAAGACCAGATTCAAAAAGACAGTGCCGGTTTTCTGGATGCC
TTGCGCAGCCGTCGGTTTCTGGATGTGTCTGAATGA

Upstream 100 bases:

>100_bases
CAACTCGACGCACTTTGGGGGGCCTATGTTGCGCCCGCGCGTGTGCCGCCCGGGGCTTGGGTGCCCGGCGACGGGCTATT
GTTACAAAGGGCTTCGTGAT

Downstream 100 bases:

>100_bases
AACCACCCGCCCCGATTGCGATGCTGGCGGAGTTGACGCACCGCTGCCCCCTGTCCTGCCCCTATTGTTCAAACCCTGTC
GAGTTGACCCGGCAAAACGC

Product: coenzyme PQQ synthesis protein D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MLSTDIPCLPRGVRLHHDRIRNAWVLLAPERAITLDAVGHAILNEVDGARSFGEITSVLADRYDAPQDQIQKDSAGFLDA
LRSRRFLDVSE

Sequences:

>Translated_91_residues
MLSTDIPCLPRGVRLHHDRIRNAWVLLAPERAITLDAVGHAILNEVDGARSFGEITSVLADRYDAPQDQIQKDSAGFLDA
LRSRRFLDVSE
>Mature_91_residues
MLSTDIPCLPRGVRLHHDRIRNAWVLLAPERAITLDAVGHAILNEVDGARSFGEITSVLADRYDAPQDQIQKDSAGFLDA
LRSRRFLDVSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10154; Mature: 10154

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTDIPCLPRGVRLHHDRIRNAWVLLAPERAITLDAVGHAILNEVDGARSFGEITSVLA
CCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHH
DRYDAPQDQIQKDSAGFLDALRSRRFLDVSE
HHCCCCHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSTDIPCLPRGVRLHHDRIRNAWVLLAPERAITLDAVGHAILNEVDGARSFGEITSVLA
CCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHH
DRYDAPQDQIQKDSAGFLDALRSRRFLDVSE
HHCCCCHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA