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The map label for this gene is bkdR [H]

Identifier: 110678377

GI number: 110678377

Start: 1001415

End: 1001879

Strand: Direct

Name: bkdR [H]

Synonym: RD1_1034

Alternate gene names: 110678377

Gene position: 1001415-1001879 (Clockwise)

Preceding gene: 110678375

Following gene: 110678378

Centisome position: 24.23

GC content: 59.78

Gene sequence:

>465_bases
GTGCGAATGACGCTTGATACCACAGACAAACGCATATTGGGCGCGCTTCAGCGTGCGGGGCGTATGTCAAATGCGGATCT
CAGCGATGCGGTCAACCTGTCGCCTTCTGCCTGTCACCGGCGTGTTCAGCGTCTGGAAAAGGACGGGTACATCAAGGATT
ACGTAGCCCTTCTGGATGCGCGCAAGATGGGCGTGCCGACGACCGTTTTTGTGGAGATCACGCTGCAGGCGCAGGCGGAT
GAGGTGCTGGACGCCTTCGAGAAAGCAGTGGCGCGCATCCCGGACGTGCTGGAGTGTCACCTGATGGCGGGGACCGCGGA
TTACCTGCTGAAGGTGGTGGCCGAAAATACGGATGATTTTGCCCGTATCCACCGCCAGTACCTTGCACGCCTGCCAGGCG
TCGCGCAGATGCAGTCGAGCTTTGCGCTCAGGACGGTGTTCAAAACCACTGCGTTGCCGGTCTGA

Upstream 100 bases:

>100_bases
ATACGAAGTCTTTGGCGCAAATAGGCGCGAAATAAACCTTGCCTCTAGTTGATTTATTGAAAGAAATCACCGCTAATGTA
CGCAAAATCGAACGAATTGT

Downstream 100 bases:

>100_bases
TGGGAGAGGCAGGTATCGAAGTGGCCGTGGCTTATTTCTCTGGTGAGGGACATACGCGTCGTCTGGCCGAGGGTGTCGCG
GCCGGGGCGCAGGAGGCGCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRMTLDTTDKRILGALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVALLDARKMGVPTTVFVEITLQAQAD
EVLDAFEKAVARIPDVLECHLMAGTADYLLKVVAENTDDFARIHRQYLARLPGVAQMQSSFALRTVFKTTALPV

Sequences:

>Translated_154_residues
MRMTLDTTDKRILGALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVALLDARKMGVPTTVFVEITLQAQAD
EVLDAFEKAVARIPDVLECHLMAGTADYLLKVVAENTDDFARIHRQYLARLPGVAQMQSSFALRTVFKTTALPV
>Mature_154_residues
MRMTLDTTDKRILGALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVALLDARKMGVPTTVFVEITLQAQAD
EVLDAFEKAVARIPDVLECHLMAGTADYLLKVVAENTDDFARIHRQYLARLPGVAQMQSSFALRTVFKTTALPV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=39.8648648648649, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=36, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17124; Mature: 17124

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTLDTTDKRILGALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVALLDA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
RKMGVPTTVFVEITLQAQADEVLDAFEKAVARIPDVLECHLMAGTADYLLKVVAENTDDF
HHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHH
ARIHRQYLARLPGVAQMQSSFALRTVFKTTALPV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRMTLDTTDKRILGALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVALLDA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
RKMGVPTTVFVEITLQAQADEVLDAFEKAVARIPDVLECHLMAGTADYLLKVVAENTDDF
HHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHH
ARIHRQYLARLPGVAQMQSSFALRTVFKTTALPV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]