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The map label for this gene is 110678373

Identifier: 110678373

GI number: 110678373

Start: 997690

End: 998346

Strand: Direct

Name: 110678373

Synonym: RD1_1030

Alternate gene names: NA

Gene position: 997690-998346 (Clockwise)

Preceding gene: 110678370

Following gene: 110678374

Centisome position: 24.14

GC content: 63.32

Gene sequence:

>657_bases
ATGAGCGCGCTCAGGATTTTTTCGGTGGTTGGTGCTGTCGCGCTGGTGGTCGGCAGTGGCGCGGCGGCATTTGCAGCCCT
GCAAAGCTGTGCTGTACGCCTTGAACTTCTATCAGAGGTCAGCGGCTGCCCGACTGATGCTGATCTGGCGCTGGAGGCGG
AACTGGCCGCACTCGCAGCGACGCGTGCAGCCTTGCGGGACGAGATTTTCAACCGCGAAACCATTCTGGCCGCGCGCCAG
TGTGAGGCCGTGCCGCCGTCCTCCACCGCGCCGATCACGCAGCCGCAACTGGCGGCCAATGATCTTGAGGCGCTTTATGG
CTGCTGGTCCTTGGGCAGCAGCTATCAGACCCGTGATGTGGATACCGGAAAGATCGTCTCTTACCCCACGTGGCGGATGT
GTTTTGACACGCAAGGGCGCGGGAAACAGGTCATGCAGGGTGATGATGGCTCCACCTGTGAGGGGCCAGTGCAGGCGCGT
ATGGAAAGCCCCGCGCGCCTGATCCTTGGCGAAGGGGGTAACCTTGCGTGCAGCGATGGCGGCTATATCCACCGCCGCGA
TATCGCCTGCACCGCCGAGGGGGGCAGCATGGCCTGCGCGACCCTTCAGCCCGAGACCGAAGGGGCTGCAGACGTTCCTT
TCAGCCGCTGGCAATAA

Upstream 100 bases:

>100_bases
CCCTTGGGGCCGTGTTTGTCCAATTTCTTTACGGGCGATTGCCTTATTGAACCTCAGCATGGGCCGCACGTGCCGCAGCC
AAGCAAAAGGAGCGTTATTC

Downstream 100 bases:

>100_bases
AAACCGCCGCGCCGGTTGCAGCTTAGCTTTTGGTTAAGCCAGAGTAAGCCAACGACCACTTCCCTTTGGGGGCGGGCGGC
TGCATCATATCGCTCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSALRIFSVVGAVALVVGSGAAAFAALQSCAVRLELLSEVSGCPTDADLALEAELAALAATRAALRDEIFNRETILAARQ
CEAVPPSSTAPITQPQLAANDLEALYGCWSLGSSYQTRDVDTGKIVSYPTWRMCFDTQGRGKQVMQGDDGSTCEGPVQAR
MESPARLILGEGGNLACSDGGYIHRRDIACTAEGGSMACATLQPETEGAADVPFSRWQ

Sequences:

>Translated_218_residues
MSALRIFSVVGAVALVVGSGAAAFAALQSCAVRLELLSEVSGCPTDADLALEAELAALAATRAALRDEIFNRETILAARQ
CEAVPPSSTAPITQPQLAANDLEALYGCWSLGSSYQTRDVDTGKIVSYPTWRMCFDTQGRGKQVMQGDDGSTCEGPVQAR
MESPARLILGEGGNLACSDGGYIHRRDIACTAEGGSMACATLQPETEGAADVPFSRWQ
>Mature_217_residues
SALRIFSVVGAVALVVGSGAAAFAALQSCAVRLELLSEVSGCPTDADLALEAELAALAATRAALRDEIFNRETILAARQC
EAVPPSSTAPITQPQLAANDLEALYGCWSLGSSYQTRDVDTGKIVSYPTWRMCFDTQGRGKQVMQGDDGSTCEGPVQARM
ESPARLILGEGGNLACSDGGYIHRRDIACTAEGGSMACATLQPETEGAADVPFSRWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22851; Mature: 22720

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRIFSVVGAVALVVGSGAAAFAALQSCAVRLELLSEVSGCPTDADLALEAELAALAA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TRAALRDEIFNRETILAARQCEAVPPSSTAPITQPQLAANDLEALYGCWSLGSSYQTRDV
HHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DTGKIVSYPTWRMCFDTQGRGKQVMQGDDGSTCEGPVQARMESPARLILGEGGNLACSDG
CCCCEECCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCEEECCC
GYIHRRDIACTAEGGSMACATLQPETEGAADVPFSRWQ
CEEEECCEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SALRIFSVVGAVALVVGSGAAAFAALQSCAVRLELLSEVSGCPTDADLALEAELAALAA
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TRAALRDEIFNRETILAARQCEAVPPSSTAPITQPQLAANDLEALYGCWSLGSSYQTRDV
HHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DTGKIVSYPTWRMCFDTQGRGKQVMQGDDGSTCEGPVQARMESPARLILGEGGNLACSDG
CCCCEECCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCEEECCC
GYIHRRDIACTAEGGSMACATLQPETEGAADVPFSRWQ
CEEEECCEEEEECCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA