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The map label for this gene is 110678370

Identifier: 110678370

GI number: 110678370

Start: 994097

End: 995656

Strand: Direct

Name: 110678370

Synonym: RD1_1027

Alternate gene names: NA

Gene position: 994097-995656 (Clockwise)

Preceding gene: 110678369

Following gene: 110678373

Centisome position: 24.05

GC content: 61.09

Gene sequence:

>1560_bases
ATGAAACATGTGATGGGTCTGTTGATGCTCTTGCTGAGCGCGGGGGCATCCGTTGGACAGGAAACGGACAGCGCGACATG
GGATGCAGAGTTGGTTGATCCGGCCGGGGGGGCGGATTTGATCCTGCCGTTGCCCTGTGGCGGTGGCATGGCATTTCAGC
GGGTCGCGGTGCCGGTCGATGTGGCAGATCCGATTGATGATCGGCCGTTTCGCATGGGCCAGTCGCAGGAATCCACCGGC
TTTTCAGATTACCTGACCCCGGCGTTCCTGCGCGGCGCGTTCTATACGCAGGAGGGGTCGTATTACTATATCGCGCGCTA
TGAGATGAACGTCGCGCAATACCGCGCCCTGACGGGGGCGTGCGATGCGCCCTTTACCCGCAAGGATCGTTTTGCCCAAG
GCGATCTGAGCTGGTTCGAGGCTGTCAACCTGACCCGCCTGATGACGGAATGGATTTTGCAGAACGCAGCCGACAGCCTG
CCTGCGCAGGGTACGCGCAAGGGTTTCGTGCGGCTGCCAACTGAGGTTGAATGGGAATATGCAACGCGGGGTGGGGCAAA
GGTGGATCCGACGCTGTTCCCGGGTCGGCGGTTTTTTGAGGACGGCGCATTGTCTGACTATGCCCATTTTCAGGCCGCAG
GTCAGGGGCGTGGCAAGTTGCGCCCCGTCGGGCTGCGTGCGCCAAATCCCGTGGGGCTGTTTGATGTCTATGGCAATGCC
GAAGAGCTGATGCTGGAGCCCTTTCGTCTGAATGCGGTGGGCCGTCAGCATGGGCAAGCGGGCGGTGTTGTGACACGCGG
CGGCTCGATTGATACAACGCCAGAGAACATCTATTCCGCACAGCGGCGCGAATATCCGATGTTCAACCCGCGTTCGGGCA
TGGCGCAAAGCGGCAGTTTCTTTGGTCTGCGCCCGGTGATCGGCGCGCATATCGTGACGGATGCGGATTATGATGCGATC
CGCAATGGTTGGCTCGCGCGGGTGGAAACGGGTGAGACGTCGGAAAGTGCCGAACCCCTGACAGCGCTTGCCGCCTTGCT
CGAAGAAGAGATCGACCCACGTCGCAAACAGGCGTTGAGCGATCTGCAACTGAGCTTCCGACTGGCCCGCGAGGCGGCGG
AGACATCGACGCGGCAGGCGGCGAAATCCACCCTGATCAGCGGGGCGGCATTTGTGGAAACCCTTGTGGAGGACGCGCGG
GCGATCCAGCAGCTTGATTTGCAATTGCGCGCGCTGCGCGATCAGGCCCGCGTGGCTGTCGGCACCCCGCAGCACCCGCA
ATTGATGGTCGCTTTTCGAAACACTCTGGAACGTCTGGGTCAGTTGCGCGAAGGGCAGGCGACCTATCTGCTGTCCTATC
GGGCCGCTCTTGAAACGCTTACCAATGATGTGGAGGGTGCGACGCTGGATACCGCCTATCAGACCCTGTCGCAGGACCTG
ATCGAGGCCGAACAGGTCCCGTTTCTTGAGATGCTGCGCCAGTTCTGGCGCGATCTGGAGGCATATCGCGAACAGCCTGA
CATGAGCCAACAGGATTTGCTGGCGCTGGCGGTACGCTAA

Upstream 100 bases:

>100_bases
TTGTGCTCGCAGTCAGCGTGTTCGTCATCGCCTCATCACTGTTTGCAGCGCGTGCGGTTCTGCGCATTGATCCGGCAACG
GTGCTGAGAGAGGGGGCAAC

Downstream 100 bases:

>100_bases
CCCCTAAAGCGTCATGCGAAAAATCTGACCCACGTAATGCTGCCTGAAATCAAGGGTTTCAACGTGTTGCGTGATACTTG
GTTTTTCAGGTATTTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MKHVMGLLMLLLSAGASVGQETDSATWDAELVDPAGGADLILPLPCGGGMAFQRVAVPVDVADPIDDRPFRMGQSQESTG
FSDYLTPAFLRGAFYTQEGSYYYIARYEMNVAQYRALTGACDAPFTRKDRFAQGDLSWFEAVNLTRLMTEWILQNAADSL
PAQGTRKGFVRLPTEVEWEYATRGGAKVDPTLFPGRRFFEDGALSDYAHFQAAGQGRGKLRPVGLRAPNPVGLFDVYGNA
EELMLEPFRLNAVGRQHGQAGGVVTRGGSIDTTPENIYSAQRREYPMFNPRSGMAQSGSFFGLRPVIGAHIVTDADYDAI
RNGWLARVETGETSESAEPLTALAALLEEEIDPRRKQALSDLQLSFRLAREAAETSTRQAAKSTLISGAAFVETLVEDAR
AIQQLDLQLRALRDQARVAVGTPQHPQLMVAFRNTLERLGQLREGQATYLLSYRAALETLTNDVEGATLDTAYQTLSQDL
IEAEQVPFLEMLRQFWRDLEAYREQPDMSQQDLLALAVR

Sequences:

>Translated_519_residues
MKHVMGLLMLLLSAGASVGQETDSATWDAELVDPAGGADLILPLPCGGGMAFQRVAVPVDVADPIDDRPFRMGQSQESTG
FSDYLTPAFLRGAFYTQEGSYYYIARYEMNVAQYRALTGACDAPFTRKDRFAQGDLSWFEAVNLTRLMTEWILQNAADSL
PAQGTRKGFVRLPTEVEWEYATRGGAKVDPTLFPGRRFFEDGALSDYAHFQAAGQGRGKLRPVGLRAPNPVGLFDVYGNA
EELMLEPFRLNAVGRQHGQAGGVVTRGGSIDTTPENIYSAQRREYPMFNPRSGMAQSGSFFGLRPVIGAHIVTDADYDAI
RNGWLARVETGETSESAEPLTALAALLEEEIDPRRKQALSDLQLSFRLAREAAETSTRQAAKSTLISGAAFVETLVEDAR
AIQQLDLQLRALRDQARVAVGTPQHPQLMVAFRNTLERLGQLREGQATYLLSYRAALETLTNDVEGATLDTAYQTLSQDL
IEAEQVPFLEMLRQFWRDLEAYREQPDMSQQDLLALAVR
>Mature_519_residues
MKHVMGLLMLLLSAGASVGQETDSATWDAELVDPAGGADLILPLPCGGGMAFQRVAVPVDVADPIDDRPFRMGQSQESTG
FSDYLTPAFLRGAFYTQEGSYYYIARYEMNVAQYRALTGACDAPFTRKDRFAQGDLSWFEAVNLTRLMTEWILQNAADSL
PAQGTRKGFVRLPTEVEWEYATRGGAKVDPTLFPGRRFFEDGALSDYAHFQAAGQGRGKLRPVGLRAPNPVGLFDVYGNA
EELMLEPFRLNAVGRQHGQAGGVVTRGGSIDTTPENIYSAQRREYPMFNPRSGMAQSGSFFGLRPVIGAHIVTDADYDAI
RNGWLARVETGETSESAEPLTALAALLEEEIDPRRKQALSDLQLSFRLAREAAETSTRQAAKSTLISGAAFVETLVEDAR
AIQQLDLQLRALRDQARVAVGTPQHPQLMVAFRNTLERLGQLREGQATYLLSYRAALETLTNDVEGATLDTAYQTLSQDL
IEAEQVPFLEMLRQFWRDLEAYREQPDMSQQDLLALAVR

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57282; Mature: 57282

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVMGLLMLLLSAGASVGQETDSATWDAELVDPAGGADLILPLPCGGGMAFQRVAVPVD
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHHEEEECEE
VADPIDDRPFRMGQSQESTGFSDYLTPAFLRGAFYTQEGSYYYIARYEMNVAQYRALTGA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEEEEECCHHHHHHHHCC
CDAPFTRKDRFAQGDLSWFEAVNLTRLMTEWILQNAADSLPAQGTRKGFVRLPTEVEWEY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECEEH
ATRGGAKVDPTLFPGRRFFEDGALSDYAHFQAAGQGRGKLRPVGLRAPNPVGLFDVYGNA
HCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCH
EELMLEPFRLNAVGRQHGQAGGVVTRGGSIDTTPENIYSAQRREYPMFNPRSGMAQSGSF
HHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
FGLRPVIGAHIVTDADYDAIRNGWLARVETGETSESAEPLTALAALLEEEIDPRRKQALS
CCCHHHHCCCEEECCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
DLQLSFRLAREAAETSTRQAAKSTLISGAAFVETLVEDARAIQQLDLQLRALRDQARVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
GTPQHPQLMVAFRNTLERLGQLREGQATYLLSYRAALETLTNDVEGATLDTAYQTLSQDL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IEAEQVPFLEMLRQFWRDLEAYREQPDMSQQDLLALAVR
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKHVMGLLMLLLSAGASVGQETDSATWDAELVDPAGGADLILPLPCGGGMAFQRVAVPVD
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHHEEEECEE
VADPIDDRPFRMGQSQESTGFSDYLTPAFLRGAFYTQEGSYYYIARYEMNVAQYRALTGA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEEEEECCHHHHHHHHCC
CDAPFTRKDRFAQGDLSWFEAVNLTRLMTEWILQNAADSLPAQGTRKGFVRLPTEVEWEY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECEEH
ATRGGAKVDPTLFPGRRFFEDGALSDYAHFQAAGQGRGKLRPVGLRAPNPVGLFDVYGNA
HCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCH
EELMLEPFRLNAVGRQHGQAGGVVTRGGSIDTTPENIYSAQRREYPMFNPRSGMAQSGSF
HHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
FGLRPVIGAHIVTDADYDAIRNGWLARVETGETSESAEPLTALAALLEEEIDPRRKQALS
CCCHHHHCCCEEECCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
DLQLSFRLAREAAETSTRQAAKSTLISGAAFVETLVEDARAIQQLDLQLRALRDQARVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
GTPQHPQLMVAFRNTLERLGQLREGQATYLLSYRAALETLTNDVEGATLDTAYQTLSQDL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IEAEQVPFLEMLRQFWRDLEAYREQPDMSQQDLLALAVR
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA