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The map label for this gene is 110678369

Identifier: 110678369

GI number: 110678369

Start: 992904

End: 994100

Strand: Direct

Name: 110678369

Synonym: RD1_1026

Alternate gene names: NA

Gene position: 992904-994100 (Clockwise)

Preceding gene: 110678368

Following gene: 110678370

Centisome position: 24.02

GC content: 61.32

Gene sequence:

>1197_bases
ATGCTGATCCTGCGTCTTGCTCTGCGTGATCTGTTTTTCCAGAAGGTGCATCTGATCTGCAACATCGCGGTGCTGGCCGG
GGTTCTGGTGCCGCTTCTGGTGTTATTCGGTGTCAAAAACGGTGTCTACAACGCGCTGATCGGGGAGTTGCTGAGCAACC
CGAGGTCCGTGCAGATCGACACCTCCGGCAATGCCACGTTTTCCACAGCGGACGCCGAAACAGTTCGGGGCTGGCCCGAG
GCCGGATTTGTGACCCTGAAAACGCGCAGCCAGTTCGATTTCGTGAATGTACGGCTGGAGGGCGGGCGGCAAAAACGCGA
TGCGATCCTGATCCCCAGTGGCGCAGGCGATCCCAACCTGCCAGAAGGTCTGGCGCTGGATGCAGGTGCTGCCGTGATCA
GCGCGCAACTGGCCGATCAGCTTGAGATCAGTGCCGGGGACCGCATTGATGTCATCACACAGGCAGAGGACCGCCCGCGG
CAACTGCGTATCCAGCTGGACGTGGTGGCGGTATTGCCGGCTGAACGCGCCTCCGGTCGCGCCGTGCTGGCGCGGATCGA
CGTTCTTGATCTGGTCGAGGCGTTTTACGACGCCTATGCCCTGCCGGAGTACGGCATCACGCAGGGCAAGCCACTGTCTG
ATCGCGCGGCGGTTTTCGAGGGCATGCGCGTCTACGCCGTTGGTCTGCAAGAACTTGCGCCCCTGCAAAACCGGATTGAA
AGTGAATTCGGCATCCGCACCGAAGCGCGCACTGCCCAGGTGCAGGGTGTCCTGAACCTTGGGCGCAACCTCAACCTTGC
GCTTTTGCTGACCGCATCGGTTGCCAGTCTGGGACTGGCCGCAGCGCTGGTGTTTGGCTTTTGGGGCGAAGTGCAGCGCA
AGCGGCAGGTTCTGGCGTCACTTGCGCTGATGGGGCTGGGTGGGCAACGGCTGTGGCTGTTTCCAATGATACAGGCGCTG
GTGTCTTCTGCGCTGGCTTTGGTGGTCTCCTTTGCCTTGCTGGGCCTTGCCGCATTGGTGGCAGAGCAGATGTTCGATAC
CGGTCTGGCCGCAGGCGGGCTGGTGCAGATAACGACGGGGCAGGTCATGGTGATTGTGCTCGCAGTCAGCGTGTTCGTCA
TCGCCTCATCACTGTTTGCAGCGCGTGCGGTTCTGCGCATTGATCCGGCAACGGTGCTGAGAGAGGGGGCAACATGA

Upstream 100 bases:

>100_bases
TGCAGATCACCTCGGCACCGCATGACCCGGATGTGGTCAGCACCCTCGTGGCCATGAACACACAAGGCGCGACATCGCCA
TCTGACCGGGTAGACGTCTG

Downstream 100 bases:

>100_bases
AACATGTGATGGGTCTGTTGATGCTCTTGCTGAGCGCGGGGGCATCCGTTGGACAGGAAACGGACAGCGCGACATGGGAT
GCAGAGTTGGTTGATCCGGC

Product: ABC transporter, permease protein, putative

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Transmembrane Protein; Abc Transporter Permease Protein; Permease Protein Of ABC Transporter

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLILRLALRDLFFQKVHLICNIAVLAGVLVPLLVLFGVKNGVYNALIGELLSNPRSVQIDTSGNATFSTADAETVRGWPE
AGFVTLKTRSQFDFVNVRLEGGRQKRDAILIPSGAGDPNLPEGLALDAGAAVISAQLADQLEISAGDRIDVITQAEDRPR
QLRIQLDVVAVLPAERASGRAVLARIDVLDLVEAFYDAYALPEYGITQGKPLSDRAAVFEGMRVYAVGLQELAPLQNRIE
SEFGIRTEARTAQVQGVLNLGRNLNLALLLTASVASLGLAAALVFGFWGEVQRKRQVLASLALMGLGGQRLWLFPMIQAL
VSSALALVVSFALLGLAALVAEQMFDTGLAAGGLVQITTGQVMVIVLAVSVFVIASSLFAARAVLRIDPATVLREGAT

Sequences:

>Translated_398_residues
MLILRLALRDLFFQKVHLICNIAVLAGVLVPLLVLFGVKNGVYNALIGELLSNPRSVQIDTSGNATFSTADAETVRGWPE
AGFVTLKTRSQFDFVNVRLEGGRQKRDAILIPSGAGDPNLPEGLALDAGAAVISAQLADQLEISAGDRIDVITQAEDRPR
QLRIQLDVVAVLPAERASGRAVLARIDVLDLVEAFYDAYALPEYGITQGKPLSDRAAVFEGMRVYAVGLQELAPLQNRIE
SEFGIRTEARTAQVQGVLNLGRNLNLALLLTASVASLGLAAALVFGFWGEVQRKRQVLASLALMGLGGQRLWLFPMIQAL
VSSALALVVSFALLGLAALVAEQMFDTGLAAGGLVQITTGQVMVIVLAVSVFVIASSLFAARAVLRIDPATVLREGAT
>Mature_398_residues
MLILRLALRDLFFQKVHLICNIAVLAGVLVPLLVLFGVKNGVYNALIGELLSNPRSVQIDTSGNATFSTADAETVRGWPE
AGFVTLKTRSQFDFVNVRLEGGRQKRDAILIPSGAGDPNLPEGLALDAGAAVISAQLADQLEISAGDRIDVITQAEDRPR
QLRIQLDVVAVLPAERASGRAVLARIDVLDLVEAFYDAYALPEYGITQGKPLSDRAAVFEGMRVYAVGLQELAPLQNRIE
SEFGIRTEARTAQVQGVLNLGRNLNLALLLTASVASLGLAAALVFGFWGEVQRKRQVLASLALMGLGGQRLWLFPMIQAL
VSSALALVVSFALLGLAALVAEQMFDTGLAAGGLVQITTGQVMVIVLAVSVFVIASSLFAARAVLRIDPATVLREGAT

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42348; Mature: 42348

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILRLALRDLFFQKVHLICNIAVLAGVLVPLLVLFGVKNGVYNALIGELLSNPRSVQID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE
TSGNATFSTADAETVRGWPEAGFVTLKTRSQFDFVNVRLEGGRQKRDAILIPSGAGDPNL
CCCCCEEECCCHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCC
PEGLALDAGAAVISAQLADQLEISAGDRIDVITQAEDRPRQLRIQLDVVAVLPAERASGR
CCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
AVLARIDVLDLVEAFYDAYALPEYGITQGKPLSDRAAVFEGMRVYAVGLQELAPLQNRIE
EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHEEHHHHHHHHHHHHHH
SEFGIRTEARTAQVQGVLNLGRNLNLALLLTASVASLGLAAALVFGFWGEVQRKRQVLAS
HHCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALMGLGGQRLWLFPMIQALVSSALALVVSFALLGLAALVAEQMFDTGLAAGGLVQITTG
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
QVMVIVLAVSVFVIASSLFAARAVLRIDPATVLREGAT
HHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCC
>Mature Secondary Structure
MLILRLALRDLFFQKVHLICNIAVLAGVLVPLLVLFGVKNGVYNALIGELLSNPRSVQID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE
TSGNATFSTADAETVRGWPEAGFVTLKTRSQFDFVNVRLEGGRQKRDAILIPSGAGDPNL
CCCCCEEECCCHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCC
PEGLALDAGAAVISAQLADQLEISAGDRIDVITQAEDRPRQLRIQLDVVAVLPAERASGR
CCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
AVLARIDVLDLVEAFYDAYALPEYGITQGKPLSDRAAVFEGMRVYAVGLQELAPLQNRIE
EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHEEHHHHHHHHHHHHHH
SEFGIRTEARTAQVQGVLNLGRNLNLALLLTASVASLGLAAALVFGFWGEVQRKRQVLAS
HHCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALMGLGGQRLWLFPMIQALVSSALALVVSFALLGLAALVAEQMFDTGLAAGGLVQITTG
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
QVMVIVLAVSVFVIASSLFAARAVLRIDPATVLREGAT
HHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA