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The map label for this gene is 110678362

Identifier: 110678362

GI number: 110678362

Start: 980171

End: 982012

Strand: Direct

Name: 110678362

Synonym: RD1_1018

Alternate gene names: NA

Gene position: 980171-982012 (Clockwise)

Preceding gene: 110678359

Following gene: 110678363

Centisome position: 23.72

GC content: 62.81

Gene sequence:

>1842_bases
ATGGCCGAACACTTTTTGACCAAGACGCGCATTGATTTGAGCCGATGCATTGCGGCGGGCGATGCACCTGCCGTTGAGCA
ATATGAGGCATTCAATGCGCTGCTGATGGCCAAGGCCGGTCCGGATGTTGCCAAGCTGTTTGCCGAACCGCTGGTCAGCA
AGGGCAATGATCAGGCCGCGTCGACGGTGTCATGGTATTGCGACCGGGCGGGGCAGGGCGTGCCCTTGTCAAAACTCGAT
ACGGCGGAACAGAACGAGGTTGCAACGGCCCTGCGCGCGCGTCTGTCGACGTTAAAGGATCTGTTGGATGATGACGAAGC
GGCGCCCTTGGTCGCCGCTGCGCTGCACATCGGCAGTGCGGGCGATATCTGGGCGGTAGGCGGTCATCCGGTCATTGTGA
ACTGGGGTTTGATGCCCGCAGAAGGGTCAGACGCTGCAACCCGGTCAGTACATTACGCCCGCACGCTGGGTCCGTATCTG
GCGATGGATGGCGCACCACCCCTGACGCAGCAGGAGCAGGAACAACGCAGGGGGGAAAAGATCGCGGCGGTTGCGGCGGC
TTCGGCCATTGCGGGGGCGGCGGCGGGTACGGCAGCGACCGCTGGTACGGTGGATGCCACGGAGCCTGTCGCAAATGCAG
CGCAAGGCACGACCGCCGGTGCAACCGCCACCGCAGGCGGGGCAACGGATGATCCCTCAGCACCTGTACCCGGGGAGCGC
CCGGCGCGCGGGCGGGTGCCGTTGGTCGCCTGGGTGCCGCTGGTTCTGCTATTGCTGCTTTTCGGCGGGGCACTGGCCTG
GCTGCTGGTGCCGGGCAACCGCATTTTTGCGGATGATGGTGTGCAGCCGGCGGTGACGGATGAAGACACTTTACGCGCTG
CGCGCGAGATCAACCGCGCGCTGGAACAGCGGCTGGCTGATTTGAACGTGGCTCTCGAAGGCGCCGTGTGTCGGGCCGAT
GGCACCTTGCTGATGCCGGATGGGCTGACCATCGAAGGGCTGCTGCCTCCCGGTTTTGACGAAGGCACGCTGCGTGCGGG
TGAGATCATCAAGGCAGACCGCACGCCGATCCTGCCGCCCGCCTCTGACCGGGTGATGATCCCTCCGGCGGATGGGGACA
TCACCGATACGGCAACCTTGCTCAACCACATTGATGATCGCACGGCGATGGTTGTGGCGGTGTCCGATCAGGGCACGGCC
ACGGGGACGGGTTTTTTCGTGGGGCCGGATCTGCTCGTGTCGAACTTCCATGTGGTCGAAGGGGCGGATGCGCAGAATAT
CCTTGTGGTCAGCAAGGCGATGGACGGGCCGAAACGCGTCGATGTGTTGAAATCGCTGGGTCCAGTGGCCGACGTGGGCG
CGGATTTCGCGCTGCTGCGGGTGTTGGACGTGGACCAGCCGTTTTACACGCTGCGCCAGAGCGACCAGTCCATGCGGCTG
CAATCGGTGATCGCGGCGGGCTACCCCGGTGATGTGTTGCGGATCAACAGCGATTTTCAGTCCCTCAGCAGCAGCAACAA
TTTTGATGTCCCCGATTTGATTGTAACGGACGGCTCGGTGAATTCGGAACAGTCGCTTTCGGACCGCGCGCATGCCGTGA
TCCATTCGGCACCGCTGTCGGGGGGCAATTCCGGCGGACCACTGGTTGATATGTGTGGCCGCGTGGTGGGTGTGAATACC
TTCGTCTATCAGGGCGAGTTGCGGAACCTGAATTTTGCCCTTTCCATTGATGATTTGCTGGAGTTTCTGGCCGACACACC
CGCGGCCCCGACCATATCCAGCGAGGTTTGCGAGCCCTTTGTTGCCCGCCCTGCGCCTGTTTCTGTTTCGGCGGGACAGT
AG

Upstream 100 bases:

>100_bases
GGTGCTTTGGGCAGTGGACGACAGTCCGGAGTGTCAAAAACCGCAGTTTTGATTTTGCACCGACGTCAGCCGGTGCACCA
GTTATTATGCGGAGCCTGAT

Downstream 100 bases:

>100_bases
CGGGTTAGTGGTATGAATGGATCCTTTCTGACCAACACCTCGACCGAAGGGTTGCAGCCGCTCGGCACCGCCCCGCAGCG
GTCCTATGAACTTGTCAGCG

Product: periplasmic serine proteinase, putative

Products: NA

Alternate protein names: Periplasmic Serine Proteinase; Protease; Protease/Peptidase; S1/S6 Family Peptidase; Serine Protease

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MAEHFLTKTRIDLSRCIAAGDAPAVEQYEAFNALLMAKAGPDVAKLFAEPLVSKGNDQAASTVSWYCDRAGQGVPLSKLD
TAEQNEVATALRARLSTLKDLLDDDEAAPLVAAALHIGSAGDIWAVGGHPVIVNWGLMPAEGSDAATRSVHYARTLGPYL
AMDGAPPLTQQEQEQRRGEKIAAVAAASAIAGAAAGTAATAGTVDATEPVANAAQGTTAGATATAGGATDDPSAPVPGER
PARGRVPLVAWVPLVLLLLLFGGALAWLLVPGNRIFADDGVQPAVTDEDTLRAAREINRALEQRLADLNVALEGAVCRAD
GTLLMPDGLTIEGLLPPGFDEGTLRAGEIIKADRTPILPPASDRVMIPPADGDITDTATLLNHIDDRTAMVVAVSDQGTA
TGTGFFVGPDLLVSNFHVVEGADAQNILVVSKAMDGPKRVDVLKSLGPVADVGADFALLRVLDVDQPFYTLRQSDQSMRL
QSVIAAGYPGDVLRINSDFQSLSSSNNFDVPDLIVTDGSVNSEQSLSDRAHAVIHSAPLSGGNSGGPLVDMCGRVVGVNT
FVYQGELRNLNFALSIDDLLEFLADTPAAPTISSEVCEPFVARPAPVSVSAGQ

Sequences:

>Translated_613_residues
MAEHFLTKTRIDLSRCIAAGDAPAVEQYEAFNALLMAKAGPDVAKLFAEPLVSKGNDQAASTVSWYCDRAGQGVPLSKLD
TAEQNEVATALRARLSTLKDLLDDDEAAPLVAAALHIGSAGDIWAVGGHPVIVNWGLMPAEGSDAATRSVHYARTLGPYL
AMDGAPPLTQQEQEQRRGEKIAAVAAASAIAGAAAGTAATAGTVDATEPVANAAQGTTAGATATAGGATDDPSAPVPGER
PARGRVPLVAWVPLVLLLLLFGGALAWLLVPGNRIFADDGVQPAVTDEDTLRAAREINRALEQRLADLNVALEGAVCRAD
GTLLMPDGLTIEGLLPPGFDEGTLRAGEIIKADRTPILPPASDRVMIPPADGDITDTATLLNHIDDRTAMVVAVSDQGTA
TGTGFFVGPDLLVSNFHVVEGADAQNILVVSKAMDGPKRVDVLKSLGPVADVGADFALLRVLDVDQPFYTLRQSDQSMRL
QSVIAAGYPGDVLRINSDFQSLSSSNNFDVPDLIVTDGSVNSEQSLSDRAHAVIHSAPLSGGNSGGPLVDMCGRVVGVNT
FVYQGELRNLNFALSIDDLLEFLADTPAAPTISSEVCEPFVARPAPVSVSAGQ
>Mature_612_residues
AEHFLTKTRIDLSRCIAAGDAPAVEQYEAFNALLMAKAGPDVAKLFAEPLVSKGNDQAASTVSWYCDRAGQGVPLSKLDT
AEQNEVATALRARLSTLKDLLDDDEAAPLVAAALHIGSAGDIWAVGGHPVIVNWGLMPAEGSDAATRSVHYARTLGPYLA
MDGAPPLTQQEQEQRRGEKIAAVAAASAIAGAAAGTAATAGTVDATEPVANAAQGTTAGATATAGGATDDPSAPVPGERP
ARGRVPLVAWVPLVLLLLLFGGALAWLLVPGNRIFADDGVQPAVTDEDTLRAAREINRALEQRLADLNVALEGAVCRADG
TLLMPDGLTIEGLLPPGFDEGTLRAGEIIKADRTPILPPASDRVMIPPADGDITDTATLLNHIDDRTAMVVAVSDQGTAT
GTGFFVGPDLLVSNFHVVEGADAQNILVVSKAMDGPKRVDVLKSLGPVADVGADFALLRVLDVDQPFYTLRQSDQSMRLQ
SVIAAGYPGDVLRINSDFQSLSSSNNFDVPDLIVTDGSVNSEQSLSDRAHAVIHSAPLSGGNSGGPLVDMCGRVVGVNTF
VYQGELRNLNFALSIDDLLEFLADTPAAPTISSEVCEPFVARPAPVSVSAGQ

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63616; Mature: 63485

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHFLTKTRIDLSRCIAAGDAPAVEQYEAFNALLMAKAGPDVAKLFAEPLVSKGNDQAA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHH
STVSWYCDRAGQGVPLSKLDTAEQNEVATALRARLSTLKDLLDDDEAAPLVAAALHIGSA
HHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GDIWAVGGHPVIVNWGLMPAEGSDAATRSVHYARTLGPYLAMDGAPPLTQQEQEQRRGEK
CCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHCHH
IAAVAAASAIAGAAAGTAATAGTVDATEPVANAAQGTTAGATATAGGATDDPSAPVPGER
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARGRVPLVAWVPLVLLLLLFGGALAWLLVPGNRIFADDGVQPAVTDEDTLRAAREINRA
CCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHH
LEQRLADLNVALEGAVCRADGTLLMPDGLTIEGLLPPGFDEGTLRAGEIIKADRTPILPP
HHHHHHHCCEEEECEEEECCCCEECCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCC
ASDRVMIPPADGDITDTATLLNHIDDRTAMVVAVSDQGTATGTGFFVGPDLLVSNFHVVE
CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECHHHHHHCEEEEE
GADAQNILVVSKAMDGPKRVDVLKSLGPVADVGADFALLRVLDVDQPFYTLRQSDQSMRL
CCCCCCEEEEEECCCCHHHHHHHHHCCCHHHCCCCEEEEHEECCCCCHHHHHCCCHHHHH
QSVIAAGYPGDVLRINSDFQSLSSSNNFDVPDLIVTDGSVNSEQSLSDRAHAVIHSAPLS
HHHHHCCCCCCEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEECCCC
GGNSGGPLVDMCGRVVGVNTFVYQGELRNLNFALSIDDLLEFLADTPAAPTISSEVCEPF
CCCCCCHHHHHCCHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHH
VARPAPVSVSAGQ
HCCCCCCCCCCCC
>Mature Secondary Structure 
AEHFLTKTRIDLSRCIAAGDAPAVEQYEAFNALLMAKAGPDVAKLFAEPLVSKGNDQAA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHH
STVSWYCDRAGQGVPLSKLDTAEQNEVATALRARLSTLKDLLDDDEAAPLVAAALHIGSA
HHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GDIWAVGGHPVIVNWGLMPAEGSDAATRSVHYARTLGPYLAMDGAPPLTQQEQEQRRGEK
CCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHCHH
IAAVAAASAIAGAAAGTAATAGTVDATEPVANAAQGTTAGATATAGGATDDPSAPVPGER
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARGRVPLVAWVPLVLLLLLFGGALAWLLVPGNRIFADDGVQPAVTDEDTLRAAREINRA
CCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHH
LEQRLADLNVALEGAVCRADGTLLMPDGLTIEGLLPPGFDEGTLRAGEIIKADRTPILPP
HHHHHHHCCEEEECEEEECCCCEECCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCC
ASDRVMIPPADGDITDTATLLNHIDDRTAMVVAVSDQGTATGTGFFVGPDLLVSNFHVVE
CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECHHHHHHCEEEEE
GADAQNILVVSKAMDGPKRVDVLKSLGPVADVGADFALLRVLDVDQPFYTLRQSDQSMRL
CCCCCCEEEEEECCCCHHHHHHHHHCCCHHHCCCCEEEEHEECCCCCHHHHHCCCHHHHH
QSVIAAGYPGDVLRINSDFQSLSSSNNFDVPDLIVTDGSVNSEQSLSDRAHAVIHSAPLS
HHHHHCCCCCCEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEECCCC
GGNSGGPLVDMCGRVVGVNTFVYQGELRNLNFALSIDDLLEFLADTPAAPTISSEVCEPF
CCCCCCHHHHHCCHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHH
VARPAPVSVSAGQ
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA