| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is eamB [H]
Identifier: 110678343
GI number: 110678343
Start: 962539
End: 963135
Strand: Reverse
Name: eamB [H]
Synonym: RD1_0999
Alternate gene names: 110678343
Gene position: 963135-962539 (Counterclockwise)
Preceding gene: 110678345
Following gene: 110678342
Centisome position: 23.3
GC content: 61.47
Gene sequence:
>597_bases ATGCCTTATGAAACACTCTCCGCCCTCGTGGTTTTCGCCTTTGTCAGTTCGGTAACGCCCGGGCCAAATAACCTGATGCT GATGGCCTCTGGTGCCAACTTCGGTTTTTCCCGGTCCGTGCCGCATATGCTGGGTATCGCCATCGGCTTTACGCTGATGA TCGTCGCCGTGGGTGCCGGGCTGATCAGGCTTTTTGACGCCTGGCCGCCCAGCTATACGGTGCTGAAAGTCTGCTCCGTC GCCTATATGACATGGCTGGCATGGAAAATCGCGCGCGCAGGCCCGGCCAAATCGGGCGAGGCGCAGGGCAGGCCGATGAC ATTCCTGCAGGCCGCCGCCTTTCAGTGGGTCAACCCAAAGGCATGGGCCATGGCCCTGACCGCCCTGTCGGTCTATGCAA CGGATGCCACGCTGGTTGCGTTCAGCCTTGTGGCCTTGGTGTTCGGACTGGTGAACCTGCCGTCGATCACGCTCTGGGCG GTTCTGGGCCAGCAAATGGCGCGCATCCTGACGAACCCGCTGCGCTTGCGCGTTTTCAACTGCACCATGGCCGCCCTGCT GATGGCCTCTCTCATTCCGATGCTCTGGCCCGCGTGA
Upstream 100 bases:
>100_bases GTTCGGTTTTCTGGTCAAGGCTGGTCATTAATTGTGATTATTCCGCAAAATCCGAAAATTTTGCAATCCACATATATTTC GAATGCGCCATTCTTTGCGC
Downstream 100 bases:
>100_bases TCCCGTTGCAAAGCCCCGCAATGCCCGCCATATAGGACCCGTTCAATCGGAGTGGCTCATGACGCAATATATGGATTTCG AAAAACCTCTTGCCGAGATT
Product: amino acid transporter LysE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSV AYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWA VLGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA
Sequences:
>Translated_198_residues MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSV AYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWA VLGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA >Mature_197_residues PYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSVA YMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAV LGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21286; Mature: 21155
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAG CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LIRLFDAWPPSYTVLKVCSVAYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH AWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAVLGQQMARILTNPLRLRVFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHH CTMAALLMASLIPMLWPA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure PYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAG CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LIRLFDAWPPSYTVLKVCSVAYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH AWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAVLGQQMARILTNPLRLRVFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHH CTMAALLMASLIPMLWPA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA