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The map label for this gene is ybzH [H]

Identifier: 110678337

GI number: 110678337

Start: 957791

End: 958105

Strand: Direct

Name: ybzH [H]

Synonym: RD1_0992

Alternate gene names: 110678337

Gene position: 957791-958105 (Clockwise)

Preceding gene: 110678335

Following gene: 110678338

Centisome position: 23.17

GC content: 54.6

Gene sequence:

>315_bases
ATGGACATCGAGAGATCAATATCAGCGCTGAACAACCCGCTGCGTCGCCAGATTCTGGAATGGCTGAAAGACCGGTCAAA
CTTTCCGCCCGCCCTGCCGGAGCATGAAGACCTTGAGGGCGTCTGTGTCGCGCATATTCAGGAGAAGGCAAAGCTGTCTC
AATCCACGATATCAAATTACATGGGGGTGTTGAAACAGGCCGGTTTCGTGCGCGCAGAACGCCATGGGCAATGGACGTTT
TACCGGCGTGAGGAAGCGAACATTCGCGCGTTTCTCGCGGCGGTTCAGGATGAACTGTTGAATCCACGGAAGTAG

Upstream 100 bases:

>100_bases
GGAGGCAAACACGGGTTCTCATGTCAGTTCGTTTTCGCGACTGCGCGGGGGGGCGGGCACGGGTGTTGACTTTCGCCTTT
ATATCGAGATATCTCGATTT

Downstream 100 bases:

>100_bases
AGGTGCAGCATATCACATCGAAACACGCGCCTATAAAGTGATATATCGAAATATGCCGATAGAAAGATAATGATATGAAG
AACCCATTGGCCCAACCGCT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDIERSISALNNPLRRQILEWLKDRSNFPPALPEHEDLEGVCVAHIQEKAKLSQSTISNYMGVLKQAGFVRAERHGQWTF
YRREEANIRAFLAAVQDELLNPRK

Sequences:

>Translated_104_residues
MDIERSISALNNPLRRQILEWLKDRSNFPPALPEHEDLEGVCVAHIQEKAKLSQSTISNYMGVLKQAGFVRAERHGQWTF
YRREEANIRAFLAAVQDELLNPRK
>Mature_104_residues
MDIERSISALNNPLRRQILEWLKDRSNFPPALPEHEDLEGVCVAHIQEKAKLSQSTISNYMGVLKQAGFVRAERHGQWTF
YRREEANIRAFLAAVQDELLNPRK

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12059; Mature: 12059

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIERSISALNNPLRRQILEWLKDRSNFPPALPEHEDLEGVCVAHIQEKAKLSQSTISNY
CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGVLKQAGFVRAERHGQWTFYRREEANIRAFLAAVQDELLNPRK
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIERSISALNNPLRRQILEWLKDRSNFPPALPEHEDLEGVCVAHIQEKAKLSQSTISNY
CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGVLKQAGFVRAERHGQWTFYRREEANIRAFLAAVQDELLNPRK
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]