| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is deaD [H]
Identifier: 110678334
GI number: 110678334
Start: 952996
End: 955113
Strand: Reverse
Name: deaD [H]
Synonym: RD1_0988
Alternate gene names: 110678334
Gene position: 955113-952996 (Counterclockwise)
Preceding gene: 110678336
Following gene: 110678327
Centisome position: 23.11
GC content: 64.02
Gene sequence:
>2118_bases GTGGCTCTACCGATAGGATATTTCGTGCTCAAGACCCTTTCAGATGCGCTGGCCGAACAAGGCTATGACACCCTCACCCC GGTTCAGGAAGCCGTCACCGCACCCGAACTGGCAAAGGCCGATTTGCTGGTCTCGGCACAGACCGGGTCCGGCAAAACGG TCGGCTTCGGGCTGGCGATTGCGCCCACACTGCTGGGGGAGCAGGAACATTTTGGCCCCGCAGGCACCCCGCTGGCGCTG ATCATCGCCCCGACACGCGAGTTGGCACAGCAGGTCGCGCGCGAACTGTCCTGGCTCTATGCCAAGGCGGGGGCGGTCGT GATCTCCTGTGTCGGCGGCATGGACACGCGCACCGAACGGCGTGCCCTTGATCGCGGGGCTCATGTGGTTGTGGCCACGC CGGGGCGGCTGTGCGATCACATCAAGCGTGGCAATATCGAACTGTCCGGCCTGCGCGCCGTGGTTCTGGACGAAGCGGAT GAAATGCTCGACCTCGGGTTTCGCGAAGAGCTTGAATTCATCCTCGATGAAGCGCCCACGGACCGCCGCACCCTGCTGTT TTCCGCAACCGTGCCAAAGGCCATCGCCAAGCTGGCCGAAAGCTATCAGCGCGATGCGCAGCGCATCGAAACCGTCTCCG AAACCCGCCAGCACGCAGATATCGAATACCGCGCCCTCAACACACATCCGCGCGACGTGGAAAACGCGATCATCAATGTC CTGCGCTTTTACGAGGCCAAGAACGCGATCGTCTTTTGCAACACGCGCGCCGCTGTTGCGCGGCTTACGACGCGCTTTAC CAATCGCGGATTTTCGGTCGTCGCACTCTCGGGTGAGTTGACCCAATCCGAACGCAGCAACGCCTTGCAAGCGCTGCGCG ATGGGCGCGCGCGCGTCTGCGTTGCCACCGATGTGGCCGCGCGCGGCATTGATCTGCCCAACCTCGAACTGGTGATCCAC GCCGATCTGCCGAGCAATTCCGACACGCTGTTGCACCGCTCCGGGCGCACGGGGCGGGCCGGGCGCAAAGGGGTCTCGGC GCTGATCGTGCCCCCGAAACTGCGCACAAAGGCGAACCGTCTGCTGGGCTGGGCGAAACTCAAAGCGGAATGGGGCACAC CGCCTTCTGCGGCTGAGGTCAACGCGCAGGATACCGCGCGCTTGCTGTCGGATCCGCTGTGGAATGCCACCGTCAGCGAG GAGGCCGAAGAGCTTGTCGCGCAACTCGCGCAGGATTTCTCCGCCACGCAATTGGCGCAGGCGGTGGTGAGCTTTTATCA GGCGCAACGCTCCGCACCCGAGGAATTGACCGATCCCACAACCCCGGATGACCGGCCTCGCAAGACCTTTGGCCCCTCGG TCTGGTTCTCGGTTTCAGTCGGGCGCGACGCGGGTGCCGAACCCCGCACACTCCTGCCGATGATCTGCAACAAGGGCGAT ATGACAAAGGATGACATCGGCGCCATCCGCATCCGGCAGGACCAGAGTTTTGTCGAAGTGCTGGCGTCACGGGCGGATGG GCTGGTTGCCGCGCTCGGCAGCGACATGACGCTCGAAGCCGGGGTTGTGCTGACCCGTCTGGCCCAAGCACCCGATCTGG GGCAGGACCGTCCCGGCACCAGCAAGCCCGGTGCCAAACCACACCGCAAAAAACGGCCCGAGGACCGCGATGCCCGTCCT GAACGCGCCGCAAGACCTGCCCGCGCTGCAAGCCCCGCGCAGGACGCACGCAAGGACAAACCGCACAAACCGGCGGCCGC CGCCAAAGGCAAAAAGCCACCCAAATCACACAAGACCGAACGCTCCCCCATGAAACCGGGGGCCGCGCCCAAACCCAAAA GCACCAGAGGCGAAAACCCGGATCGCAAACCCGGCAAGGCCAAAGCGGTCTGGACAAAGGACGCCCGCGACACCGCCAGA GCGGAAAAAGTCACCCGCGACAAGGCTCACCGCGAAGACAGCGGTGCCGGGCGCCCCACAGCAAAAGGTGGCCCCAGAAA AGACCCAAGCGCATCGAAAAAGCGCGCCGCAGATACATCAAAACGCTTCGTGCCCCCGCATAAACGCGGCAAATCAACCG GCAAGGGCCCGAATGCGCGCCCTCAGCGCAAAGGCTGA
Upstream 100 bases:
>100_bases GACACCTGCGGGCGTGATCCGAAAAGGTGATCGACTCTCGACCGTCAAAGGCATAACGACGCCTCAACAGGTCGCAAGCG ACCGACTGAAGCCACCTCCC
Downstream 100 bases:
>100_bases GGCGCACCTGAAGCGTCATGCGAAAAACATGAATCACGCAACGCTGCCTGAAATCCAGGATTTCAACGCGCTGCGCGATA CTTGATGTTCGAGGTATTTC
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MALPIGYFVLKTLSDALAEQGYDTLTPVQEAVTAPELAKADLLVSAQTGSGKTVGFGLAIAPTLLGEQEHFGPAGTPLAL IIAPTRELAQQVARELSWLYAKAGAVVISCVGGMDTRTERRALDRGAHVVVATPGRLCDHIKRGNIELSGLRAVVLDEAD EMLDLGFREELEFILDEAPTDRRTLLFSATVPKAIAKLAESYQRDAQRIETVSETRQHADIEYRALNTHPRDVENAIINV LRFYEAKNAIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERSNALQALRDGRARVCVATDVAARGIDLPNLELVIH ADLPSNSDTLLHRSGRTGRAGRKGVSALIVPPKLRTKANRLLGWAKLKAEWGTPPSAAEVNAQDTARLLSDPLWNATVSE EAEELVAQLAQDFSATQLAQAVVSFYQAQRSAPEELTDPTTPDDRPRKTFGPSVWFSVSVGRDAGAEPRTLLPMICNKGD MTKDDIGAIRIRQDQSFVEVLASRADGLVAALGSDMTLEAGVVLTRLAQAPDLGQDRPGTSKPGAKPHRKKRPEDRDARP ERAARPARAASPAQDARKDKPHKPAAAAKGKKPPKSHKTERSPMKPGAAPKPKSTRGENPDRKPGKAKAVWTKDARDTAR AEKVTRDKAHREDSGAGRPTAKGGPRKDPSASKKRAADTSKRFVPPHKRGKSTGKGPNARPQRKG
Sequences:
>Translated_705_residues MALPIGYFVLKTLSDALAEQGYDTLTPVQEAVTAPELAKADLLVSAQTGSGKTVGFGLAIAPTLLGEQEHFGPAGTPLAL IIAPTRELAQQVARELSWLYAKAGAVVISCVGGMDTRTERRALDRGAHVVVATPGRLCDHIKRGNIELSGLRAVVLDEAD EMLDLGFREELEFILDEAPTDRRTLLFSATVPKAIAKLAESYQRDAQRIETVSETRQHADIEYRALNTHPRDVENAIINV LRFYEAKNAIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERSNALQALRDGRARVCVATDVAARGIDLPNLELVIH ADLPSNSDTLLHRSGRTGRAGRKGVSALIVPPKLRTKANRLLGWAKLKAEWGTPPSAAEVNAQDTARLLSDPLWNATVSE EAEELVAQLAQDFSATQLAQAVVSFYQAQRSAPEELTDPTTPDDRPRKTFGPSVWFSVSVGRDAGAEPRTLLPMICNKGD MTKDDIGAIRIRQDQSFVEVLASRADGLVAALGSDMTLEAGVVLTRLAQAPDLGQDRPGTSKPGAKPHRKKRPEDRDARP ERAARPARAASPAQDARKDKPHKPAAAAKGKKPPKSHKTERSPMKPGAAPKPKSTRGENPDRKPGKAKAVWTKDARDTAR AEKVTRDKAHREDSGAGRPTAKGGPRKDPSASKKRAADTSKRFVPPHKRGKSTGKGPNARPQRKG >Mature_704_residues ALPIGYFVLKTLSDALAEQGYDTLTPVQEAVTAPELAKADLLVSAQTGSGKTVGFGLAIAPTLLGEQEHFGPAGTPLALI IAPTRELAQQVARELSWLYAKAGAVVISCVGGMDTRTERRALDRGAHVVVATPGRLCDHIKRGNIELSGLRAVVLDEADE MLDLGFREELEFILDEAPTDRRTLLFSATVPKAIAKLAESYQRDAQRIETVSETRQHADIEYRALNTHPRDVENAIINVL RFYEAKNAIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERSNALQALRDGRARVCVATDVAARGIDLPNLELVIHA DLPSNSDTLLHRSGRTGRAGRKGVSALIVPPKLRTKANRLLGWAKLKAEWGTPPSAAEVNAQDTARLLSDPLWNATVSEE AEELVAQLAQDFSATQLAQAVVSFYQAQRSAPEELTDPTTPDDRPRKTFGPSVWFSVSVGRDAGAEPRTLLPMICNKGDM TKDDIGAIRIRQDQSFVEVLASRADGLVAALGSDMTLEAGVVLTRLAQAPDLGQDRPGTSKPGAKPHRKKRPEDRDARPE RAARPARAASPAQDARKDKPHKPAAAAKGKKPPKSHKTERSPMKPGAAPKPKSTRGENPDRKPGKAKAVWTKDARDTARA EKVTRDKAHREDSGAGRPTAKGGPRKDPSASKKRAADTSKRFVPPHKRGKSTGKGPNARPQRKG
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=350, Percent_Identity=36.8571428571429, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI50659095, Length=408, Percent_Identity=32.5980392156863, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI45446747, Length=345, Percent_Identity=34.7826086956522, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI45446743, Length=345, Percent_Identity=34.7826086956522, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI148613856, Length=357, Percent_Identity=33.8935574229692, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI38201710, Length=357, Percent_Identity=33.8935574229692, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=32.378223495702, Blast_Score=194, Evalue=4e-49, Organism=Homo sapiens, GI262118318, Length=347, Percent_Identity=35.7348703170029, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI216548263, Length=347, Percent_Identity=35.7348703170029, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI262231852, Length=347, Percent_Identity=35.7348703170029, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI13518015, Length=347, Percent_Identity=35.7348703170029, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI7661920, Length=331, Percent_Identity=32.3262839879154, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI4758138, Length=347, Percent_Identity=33.4293948126801, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI169881239, Length=359, Percent_Identity=33.4261838440111, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI13514809, Length=359, Percent_Identity=33.4261838440111, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI301171467, Length=344, Percent_Identity=34.3023255813954, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI87196351, Length=344, Percent_Identity=34.3023255813954, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI301171475, Length=344, Percent_Identity=34.3023255813954, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI41327773, Length=342, Percent_Identity=30.9941520467836, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI83700235, Length=314, Percent_Identity=33.4394904458599, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI164664518, Length=346, Percent_Identity=30.635838150289, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI41327771, Length=359, Percent_Identity=32.033426183844, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI21071032, Length=397, Percent_Identity=31.2342569269521, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI4503529, Length=314, Percent_Identity=32.484076433121, Blast_Score=177, Evalue=4e-44, Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=31.700288184438, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI31542656, Length=357, Percent_Identity=36.6946778711485, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI224593278, Length=398, Percent_Identity=30.4020100502513, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=32.1329639889197, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=30.3977272727273, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=31.8302387267904, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=31.404958677686, Blast_Score=158, Evalue=2e-38, Organism=Homo sapiens, GI38327634, Length=349, Percent_Identity=31.5186246418338, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI17505907, Length=397, Percent_Identity=28.463476070529, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI41327776, Length=344, Percent_Identity=31.1046511627907, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=30.3370786516854, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=30.3370786516854, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=28.8571428571429, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI256223453, Length=337, Percent_Identity=28.1899109792285, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=27.4285714285714, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=27.4285714285714, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI9966805, Length=316, Percent_Identity=31.3291139240506, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=30.6406685236769, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI6005743, Length=359, Percent_Identity=30.6406685236769, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=29.608938547486, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=31.1572700296736, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI256773275, Length=355, Percent_Identity=29.5774647887324, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=28.8359788359788, Blast_Score=124, Evalue=4e-28, Organism=Homo sapiens, GI38569503, Length=376, Percent_Identity=29.2553191489362, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=28.6567164179104, Blast_Score=116, Evalue=8e-26, Organism=Homo sapiens, GI154759257, Length=450, Percent_Identity=28.2222222222222, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=31.1627906976744, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI9506931, Length=388, Percent_Identity=25.5154639175258, Blast_Score=110, Evalue=6e-24, Organism=Escherichia coli, GI87082221, Length=541, Percent_Identity=31.9778188539741, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI1787605, Length=366, Percent_Identity=38.2513661202186, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1788930, Length=342, Percent_Identity=37.4269005847953, Blast_Score=187, Evalue=3e-48, Organism=Escherichia coli, GI1787016, Length=329, Percent_Identity=34.0425531914894, Blast_Score=178, Evalue=9e-46, Organism=Escherichia coli, GI1790214, Length=340, Percent_Identity=32.6470588235294, Blast_Score=165, Evalue=1e-41, Organism=Escherichia coli, GI48994977, Length=354, Percent_Identity=23.728813559322, Blast_Score=73, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71987143, Length=331, Percent_Identity=35.3474320241692, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17555296, Length=339, Percent_Identity=34.5132743362832, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17510307, Length=355, Percent_Identity=37.4647887323944, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17510309, Length=355, Percent_Identity=37.4647887323944, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71995514, Length=355, Percent_Identity=37.4647887323944, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17507121, Length=339, Percent_Identity=33.9233038348083, Blast_Score=195, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71995724, Length=339, Percent_Identity=33.9233038348083, Blast_Score=195, Evalue=7e-50, Organism=Caenorhabditis elegans, GI115533224, Length=345, Percent_Identity=35.3623188405797, Blast_Score=192, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17552642, Length=347, Percent_Identity=33.7175792507205, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI32565321, Length=368, Percent_Identity=33.4239130434783, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71995718, Length=389, Percent_Identity=32.6478149100257, Blast_Score=181, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17537549, Length=348, Percent_Identity=33.9080459770115, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17552114, Length=346, Percent_Identity=29.4797687861272, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=32.8571428571429, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17507945, Length=385, Percent_Identity=32.987012987013, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=31.4606741573034, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=32.8, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17507879, Length=413, Percent_Identity=30.2663438256659, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17507877, Length=358, Percent_Identity=31.5642458100559, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI115532548, Length=356, Percent_Identity=33.9887640449438, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI115532546, Length=360, Percent_Identity=33.8888888888889, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=29.6296296296296, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17507881, Length=346, Percent_Identity=32.0809248554913, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=29.639175257732, Blast_Score=155, Evalue=9e-38, Organism=Caenorhabditis elegans, GI71999646, Length=343, Percent_Identity=29.1545189504373, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71999644, Length=343, Percent_Identity=29.1545189504373, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=28.2485875706215, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=30.0813008130081, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=28.7323943661972, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17556951, Length=398, Percent_Identity=27.6381909547739, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=28.5276073619632, Blast_Score=137, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71990816, Length=383, Percent_Identity=30.2872062663185, Blast_Score=135, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17536103, Length=340, Percent_Identity=27.6470588235294, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17536099, Length=399, Percent_Identity=27.3182957393484, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=27.0471464019851, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=27.5401069518717, Blast_Score=127, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17508543, Length=347, Percent_Identity=26.8011527377522, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997889, Length=372, Percent_Identity=27.9569892473118, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI25148203, Length=386, Percent_Identity=24.3523316062176, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=25.3776435045317, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71987152, Length=80, Percent_Identity=47.5, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=28.3653846153846, Blast_Score=82, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=335, Percent_Identity=37.0149253731343, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321856, Length=341, Percent_Identity=37.8299120234604, Blast_Score=204, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6324778, Length=339, Percent_Identity=37.1681415929204, Blast_Score=203, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6321360, Length=328, Percent_Identity=35.9756097560976, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=35.1274787535411, Blast_Score=196, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=29.5698924731183, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=33.7950138504155, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323021, Length=346, Percent_Identity=32.9479768786127, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322912, Length=313, Percent_Identity=32.2683706070287, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322323, Length=313, Percent_Identity=32.2683706070287, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320224, Length=332, Percent_Identity=30.1204819277108, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321963, Length=348, Percent_Identity=34.1954022988506, Blast_Score=170, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6320449, Length=352, Percent_Identity=32.3863636363636, Blast_Score=168, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=28.8782816229117, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323947, Length=350, Percent_Identity=32.5714285714286, Blast_Score=164, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=31.7934782608696, Blast_Score=161, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=30.4347826086957, Blast_Score=153, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=30.2521008403361, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6324620, Length=329, Percent_Identity=29.1793313069909, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=433, Percent_Identity=28.4064665127021, Blast_Score=140, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6319714, Length=354, Percent_Identity=25.1412429378531, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321267, Length=356, Percent_Identity=28.0898876404494, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6320173, Length=233, Percent_Identity=29.6137339055794, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323306, Length=305, Percent_Identity=25.5737704918033, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324366, Length=169, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24584399, Length=370, Percent_Identity=35.1351351351351, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=33.9887640449438, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=35.6948228882834, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI24662330, Length=364, Percent_Identity=31.043956043956, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI24585582, Length=357, Percent_Identity=31.3725490196078, Blast_Score=190, Evalue=4e-48, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=32.6259946949602, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24644479, Length=338, Percent_Identity=35.207100591716, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24644483, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24644487, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI45551833, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI24644485, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI281361218, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI24644481, Length=344, Percent_Identity=35.4651162790698, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI21355075, Length=340, Percent_Identity=32.6470588235294, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24645031, Length=334, Percent_Identity=32.6347305389222, Blast_Score=186, Evalue=7e-47, Organism=Drosophila melanogaster, GI24582080, Length=315, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582078, Length=315, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136248, Length=315, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582075, Length=315, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=31.830985915493, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136814, Length=354, Percent_Identity=35.0282485875706, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI17977678, Length=366, Percent_Identity=34.6994535519126, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24584994, Length=368, Percent_Identity=30.9782608695652, Blast_Score=172, Evalue=1e-42, Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=29.4943820224719, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=29.4943820224719, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI28571808, Length=423, Percent_Identity=29.0780141843972, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571809, Length=423, Percent_Identity=29.0780141843972, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI28575014, Length=351, Percent_Identity=29.9145299145299, Blast_Score=162, Evalue=9e-40, Organism=Drosophila melanogaster, GI21356161, Length=414, Percent_Identity=29.951690821256, Blast_Score=160, Evalue=4e-39, Organism=Drosophila melanogaster, GI281365720, Length=304, Percent_Identity=33.2236842105263, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI20130173, Length=424, Percent_Identity=29.9528301886792, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=28.7749287749288, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=28.7749287749288, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=28.7749287749288, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI17647335, Length=407, Percent_Identity=28.009828009828, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=32.1621621621622, Blast_Score=138, Evalue=2e-32, Organism=Drosophila melanogaster, GI24642822, Length=360, Percent_Identity=29.4444444444444, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=30.1724137931034, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=28.8343558282209, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136666, Length=430, Percent_Identity=27.906976744186, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI19920478, Length=345, Percent_Identity=26.6666666666667, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859659, Length=204, Percent_Identity=32.843137254902, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI28571338, Length=204, Percent_Identity=32.843137254902, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24643725, Length=376, Percent_Identity=24.7340425531915, Blast_Score=100, Evalue=6e-21, Organism=Drosophila melanogaster, GI24640164, Length=343, Percent_Identity=23.9067055393586, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 76110; Mature: 75979
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPIGYFVLKTLSDALAEQGYDTLTPVQEAVTAPELAKADLLVSAQTGSGKTVGFGLAI CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEEHHHH APTLLGEQEHFGPAGTPLALIIAPTRELAQQVARELSWLYAKAGAVVISCVGGMDTRTER HHHHHCCHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHH RALDRGAHVVVATPGRLCDHIKRGNIELSGLRAVVLDEADEMLDLGFREELEFILDEAPT HHHHCCCEEEEECCHHHHHHHHCCCEEECCCEEEEHHCHHHHHHCCHHHHHHHHHHCCCC DRRTLLFSATVPKAIAKLAESYQRDAQRIETVSETRQHADIEYRALNTHPRDVENAIINV CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH LRFYEAKNAIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERSNALQALRDGRARVC HHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEE VATDVAARGIDLPNLELVIHADLPSNSDTLLHRSGRTGRAGRKGVSALIVPPKLRTKANR EEEHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHH LLGWAKLKAEWGTPPSAAEVNAQDTARLLSDPLWNATVSEEAEELVAQLAQDFSATQLAQ HHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH AVVSFYQAQRSAPEELTDPTTPDDRPRKTFGPSVWFSVSVGRDAGAEPRTLLPMICNKGD HHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCC MTKDDIGAIRIRQDQSFVEVLASRADGLVAALGSDMTLEAGVVLTRLAQAPDLGQDRPGT CCCCCCCEEEEECCHHHHHHHHHHCCCEEEHHCCCCEEHHHHHHHHHHCCCCCCCCCCCC SKPGAKPHRKKRPEDRDARPERAARPARAASPAQDARKDKPHKPAAAAKGKKPPKSHKTE CCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCC RSPMKPGAAPKPKSTRGENPDRKPGKAKAVWTKDARDTARAEKVTRDKAHREDSGAGRPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC AKGGPRKDPSASKKRAADTSKRFVPPHKRGKSTGKGPNARPQRKG CCCCCCCCCCHHHHHHHCCHHCCCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALPIGYFVLKTLSDALAEQGYDTLTPVQEAVTAPELAKADLLVSAQTGSGKTVGFGLAI CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEEHHHH APTLLGEQEHFGPAGTPLALIIAPTRELAQQVARELSWLYAKAGAVVISCVGGMDTRTER HHHHHCCHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHH RALDRGAHVVVATPGRLCDHIKRGNIELSGLRAVVLDEADEMLDLGFREELEFILDEAPT HHHHCCCEEEEECCHHHHHHHHCCCEEECCCEEEEHHCHHHHHHCCHHHHHHHHHHCCCC DRRTLLFSATVPKAIAKLAESYQRDAQRIETVSETRQHADIEYRALNTHPRDVENAIINV CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH LRFYEAKNAIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERSNALQALRDGRARVC HHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEE VATDVAARGIDLPNLELVIHADLPSNSDTLLHRSGRTGRAGRKGVSALIVPPKLRTKANR EEEHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHH LLGWAKLKAEWGTPPSAAEVNAQDTARLLSDPLWNATVSEEAEELVAQLAQDFSATQLAQ HHHHHHEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH AVVSFYQAQRSAPEELTDPTTPDDRPRKTFGPSVWFSVSVGRDAGAEPRTLLPMICNKGD HHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCC MTKDDIGAIRIRQDQSFVEVLASRADGLVAALGSDMTLEAGVVLTRLAQAPDLGQDRPGT CCCCCCCEEEEECCHHHHHHHHHHCCCEEEHHCCCCEEHHHHHHHHHHCCCCCCCCCCCC SKPGAKPHRKKRPEDRDARPERAARPARAASPAQDARKDKPHKPAAAAKGKKPPKSHKTE CCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCC RSPMKPGAAPKPKSTRGENPDRKPGKAKAVWTKDARDTARAEKVTRDKAHREDSGAGRPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC AKGGPRKDPSASKKRAADTSKRFVPPHKRGKSTGKGPNARPQRKG CCCCCCCCCCHHHHHHHCCHHCCCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]